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Browsing by Subject "Next-generation sequencing"

RiuNet: Institutional repository of the Polithecnic University of Valencia

Browsing by Subject "Next-generation sequencing"

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    Application of genomic tools in plant breeding 
    Pérez de Castro, Ana María; Vilanova Navarro, Santiago; Cañizares Sales, Joaquín; Pascual Bañuls, Laura; Blanca Postigo, José Miguel; Díez Niclós, Mª José Teresa de Jesús; Prohens Tomás, Jaime; Picó Sirvent, María Belén (Bentham Science Publishers, 2012-05)
    [EN] Plant breeding has been very successful in developing improved varieties using conventional tools and methodologies. Nowadays, the availability of genomic tools and resources is leading to a new revolution of plant ...
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    Bases moleculares de la enfermedad de Wilson y enfermedades Wilson-like 
    Vidal Garcia, Clara (Universitat Politècnica de València, 2022-07-07)
    [ES] La enfermedad de Wilson (EW) es un trastorno hereditario autosómico recesivo, con una prevalencia de 1/30.000, causado por mutaciones en ATP7B. Este gen codifica para una ATPasa transportadora de cobre, con expresión ...
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    Experimental evolution of pseudogenization and gene loss in a plant RNA virus 
    Zwart, Mark Peter; Willemsen, Anouk; Daros Arnau, Jose Antonio; Elena Fito, Santiago Fco (Oxford University Press (OUP): Molecular Biology and Evolution, 2014-01)
    [EN] Viruses have evolved highly streamlined genomes and a variety of mechanisms to compress them, suggesting that genome size is under strong selection. Horizontal gene transfer has, on the other hand, played an important ...
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    Genética molecular y biomarcadores de la enfermedad de Wilson 
    Sánchez Monteagudo, Ana (Universitat Politècnica de València, 2023-05-28)
    [ES] La enfermedad de Wilson (EW) es un trastorno hereditario del metabolismo del cobre causado por mutaciones en ATP7B, que codifica una proteína transportadora de cobre en el hígado. Su mal funcionamiento provoca un fallo ...
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    Molecular and phylogenetic identification of unique isolates of hammerhead viroid-like RNA from 'Pacific Gala' apple (Malus domestica) in Canada 
    Messmer, Amber; Sanderson, Daniel; Braun, Gordon; Flores Pedauye, Ricardo; Serra Alfonso, Pedro; James, Delano (Taylor & Francis, 2017)
    [EN] Ten isolates of apple hammerhead viroid-like RNA (AHVd RNA) were detected by next-generation sequencing (NGS) and/or by RT-PCR analysis of apple (Malus domestica) 'Pacific Gala' (PG) from Canada. All consisted of 433 ...
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    Next-generation sequencing and genome editing in plant virology 
    Hadidi, Ahmed; Flores Pedauye, Ricardo; Candresse, Thierry; Barba, Marina (Frontiers Media, 2016-08)
    [EN] Next-generation sequencing (NGS) has been applied to plant virology since 2009. NGS provides highly efficient, rapid, low cost DNA, or RNA high-throughput sequencing of the genomes of plant viruses and viroids and of ...
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    Recent Advances on the Multiplex Molecular Detection of Plant Viruses and Viroids 
    Pallás Benet, Vicente; Sanchez Navarro, Jesús Ángel; James, D. (Frontiers Media SA, 2018)
    [EN] Plant viruses are still one of the main contributors to economic losses in agriculture. It has been estimated that plant viruses can cause as much as 50 billion euros loss worldwide, per year. This situation may be ...
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    SILEX: a fast and inexpensive high-quality DNA extraction method suitable for multiple sequencing platforms and recalcitrant plant species 
    Vilanova Navarro, Santiago; Alonso-Martín, David; Gramazio, Pietro; Plazas Ávila, María de la O; García-Fortea, Edgar; Ferrante, Paola; Schmidt, Maximilian; Díez Niclós, Mª José Teresa De Jesús; Usadel, Björn; Giuliano, Giovanni; Prohens Tomás, Jaime (Springer (Biomed Central Ltd.), 2020-08-10)
    [EN] Background The use of sequencing and genotyping platforms has undergone dramatic improvements, enabling the generation of a wealth of genomic information. Despite this progress, the availability of high-quality genomic ...
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    Ultra-deep sequencing analysis of population dynamics of virus escape mutants in RNAi-mediated resistant plants 
    Martinez Garcia, Fernando; Lafforgue, Guillaume; Morelli, M.; González-Candelas, F.; CHUA, N.H.; Daros Arnau, Jose Antonio; Elena Fito, Santiago Fco (Oxford University Press (OUP), 2012-11)
    [EN] Plant artificial micro-RNAs (amiRs) have been engineered to target viral genomes and induce their degradation. However, the exceptional evolutionary plasticity of RNA viruses threatens the durability of the resistance ...