ABSTRACT Since 2002 a disease associated to branch cankers in citrus trees has been detected in the major citrus-producing areas in Spain, affecting mainly Clementine mandarins and their hybrids. The syndrome was described and Phytophthora citrophthora was identified as the causal agent according to isolate frequencies from a 132 citrus orchards survey and pathogenicity tests under greenhouse and field conditions. Using RAMS markers to study the population structure of P. citrophthora, 14 population groups were found. Around 90 % of the isolates comprising a unique population group and the remaining 10 % were divided in 13 dissimilar groups. No evidence demonstrated that this population diversity was a consequence of sexual crosses because more than 99 % of the studied isolates were sexually sterile. Some isolates also displayed high levels of insensitivity to the fungicides metalaxyl and mefenoxam. Assays of branch inoculations under field conditions carried out during a period of 27-months showed that P. citrophthora was more active in the spring months, followed by autumn, summer and winter months. Conversely, it was concluded that inoculations on detached branches it was not a valuable methodology to determine the seasonality of the different citrus scions and the aggressiveness of P. citrophthora y P. parasitica. Regression analyses between environmental and host-linked variables showed that the monthly mean maximum temperature, the relative humidity and the relative water content in the bark were the most important factors associated with the lesion development. Evidences were found about a vertical dissemination of the pathogen from the soil toward the upper canopy by mean of snails of the species Helix aspersa that was corroborated in experiments under controlled conditions. H aspersa was able to transport propagules of P. citrophthora in its body and also in its digestive tract disseminating pathogen inoculum through the feces. In reference to the disease control, it was found that in young and mature citrus trees under field conditions, post - infection applications were not effectives. However, preventive treatments based on branch or trunk paints were more effective than applications as foliar spray, chemigation or injection to the soil. In young trees, the foliar sprays showed a good behaviour in greenhouse and no significant differences were found with treatments based on paint; however, drench applications showed a limited activity. Treatments that consisted of two consecutive applications (20 to 30 days between them) did not improve significantly the efficacy of the products compared with one application.