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Listar por autor "Medina Castelló, Ignacio"

RiuNet: Repositorio Institucional de la Universidad Politécnica de Valencia

Listar por autor "Medina Castelló, Ignacio"

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    Diseño e implementación de un entorno de trabajo para la ejecución de análisis genético a gran escala 
    Roldán Pérez, Sergio (Universitat Politècnica de València, 2019-07-23)
    [ES] El trabajo de fin de grado consistirá en el desarrollo e implementacion una herramienta bioinformática big data para el análisis de datos genómicos que se integrará en los proyectos BioData, CellBase y OpenCGA de la ...
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    Fast inexact mapping using advanced tree exploration on backward search methods 
    Salavert Torres, José; Tomás Domínguez, Andrés Enrique; Tárraga Giménez, Joaquín; Medina Castelló, Ignacio; Dopazo Blazquez, Joaquin; Blanquer Espert, Ignacio (BioMed Central, 2015-01-28)
    Background: Short sequence mapping methods for Next Generation Sequencing consist on a combination of seeding techniques followed by local alignment based on dynamic programming approaches. Most seeding algorithms are ...
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    MuffinEc: Error Correction for de Novo Assembly via Greedy Partitioning and Sequence Alignment 
    Alic, Andrei Stefan; Tomás Domínguez, Andrés Enrique; Medina Castelló, Ignacio; Blanquer Espert, Ignacio (Elsevier, 2016-02-01)
    Error correction is typically the first step of de Novo genome assembly from NGS data. This step has an important impact on the quality and speed of the assembly process. However, the majority of available stand-alone error ...
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    Pair-end inexact mapping on hybrid GPU environments and out-of-core indexes 
    Salavert Torres, José; Tomás Domínguez, Andrés Enrique; Medina Castelló, Ignacio; Sadakane, Kunihiko; Blanquer Espert, Ignacio (Bentham Science Publishers, 2016)
    [EN] Due to the NGS data deluge, sequence mapping has become an intensive task that, depending on the experiment, may demand high amounts of computing power or memory capacity. On the one hand, GPGPU architectures have ...
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    Using GPUs for the exact alignment of short-read genetic sequences by means of the Burrows-Wheeler transform 
    Salavert Torres, José; Blanquer Espert, Ignacio; Tomás Domínguez, Andrés Enrique; Hernández García, Vicente; Medina Castelló, Ignacio; Tárraga Giménez, Joaquín; Dopazo Blazquez, Joaquin (Association for Computing Machinery (ACM)Institute of Electrical and Electronics Engineers (IEEE), 2012-07)
    General Purpose Graphic Processing Units (GPGPUs) constitute an inexpensive resource for computing-intensive applications that could exploit an intrinsic fine-grain parallelism. This paper presents the design and ...