Martínez-Álvaro, Marina; Auffret, Marc D.; Stewart, Robert D.; Dewhurst, Richard J.; Duthie, Carol-Anne; Rooke, John A.; Wallace, R. John; Shih, Barbara; Freeman, Tom C.; Watson, Mick; Roehe, Rainer(Frontiers Media SA, 2020-04-17)
[EN] A network analysis including relative abundances of all ruminal microbial genera (archaea, bacteria, fungi, and protists) and their genes was performed to improve our understanding of how the interactions within the ...
[EN] Accurate gene prediction is essential for successful metagenome analysis. We present KOunt, a Snakemake pipeline, that precisely
quantifies KEGG orthologue abundance.