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Listar por palabra clave "Burrows-Wheeler Transform"

RiuNet: Repositorio Institucional de la Universidad Politécnica de Valencia

Listar por palabra clave "Burrows-Wheeler Transform"

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    Highly sensitive and ultrafast read mapping for RNA-seq analysis 
    Medina, I.; Tárraga, J.; Martínez, H,; Barrachina, S.; Castillo, M. I.; Paschall, J.; Salavert Torres, José; Blanquer Espert, Ignacio; Hernández García, Vicente; Quintana Ortí, Enrique Salvador; Dopazo, J. (Oxford University Press, 2016-01)
    As sequencing technologies progress, the amount of data produced grows exponentially, shifting the bottleneck of discovery towards the data analysis phase. In particular, currently available mapping solutions for RNA-seq ...
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    Inexact Mapping of Short Biological Sequences in High Performance Computational Environments 
    Salavert Torres, José (Universitat Politècnica de València, 2014-10-30)
    La bioinformática es la aplicación de las ciencias computacionales a la gestión y análisis de datos biológicos. A partir de 2005, con la aparición de los secuenciadores de ADN de nueva generación surge lo que se conoce ...
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    Objective review of de novo stand-alone error correction methods for NGS data 
    Alic, Andrei Stefan; Ruzafa, David; Dopazo, Joaquin; Blanquer Espert, Ignacio (Wiley, 2016-04)
    [EN] The sequencing market has increased steadily over the last few years, with different approaches to read DNA information prone to different types of errors. Multiple studies demonstrated the impact of sequencing errors ...
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    Using GPUs for the exact alignment of short-read genetic sequences by means of the Burrows-Wheeler transform 
    Salavert Torres, José; Blanquer Espert, Ignacio; Tomás Domínguez, Andrés Enrique; Hernández García, Vicente; Medina Castelló, Ignacio; Tárraga Giménez, Joaquín; Dopazo Blazquez, Joaquin (Association for Computing Machinery (ACM)Institute of Electrical and Electronics Engineers (IEEE), 2012-07)
    General Purpose Graphic Processing Units (GPGPUs) constitute an inexpensive resource for computing-intensive applications that could exploit an intrinsic fine-grain parallelism. This paper presents the design and ...