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Listar por palabra clave "FM-Index"

RiuNet: Repositorio Institucional de la Universidad Politécnica de Valencia

Listar por palabra clave "FM-Index"

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    Fast inexact mapping using advanced tree exploration on backward search methods 
    Salavert Torres, José; Tomás Domínguez, Andrés Enrique; Tárraga Giménez, Joaquín; Medina Castelló, Ignacio; Dopazo Blazquez, Joaquin; Blanquer Espert, Ignacio (BioMed Central, 2015-01-28)
    Background: Short sequence mapping methods for Next Generation Sequencing consist on a combination of seeding techniques followed by local alignment based on dynamic programming approaches. Most seeding algorithms are ...
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    Pair-end inexact mapping on hybrid GPU environments and out-of-core indexes 
    Salavert Torres, José; Tomás Domínguez, Andrés Enrique; Medina Castelló, Ignacio; Sadakane, Kunihiko; Blanquer Espert, Ignacio (Bentham Science Publishers, 2016)
    [EN] Due to the NGS data deluge, sequence mapping has become an intensive task that, depending on the experiment, may demand high amounts of computing power or memory capacity. On the one hand, GPGPU architectures have ...