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Strain-dependent mutational effects for Pepino mosaic virus in a natural host

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Strain-dependent mutational effects for Pepino mosaic virus in a natural host

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dc.contributor.author Minicka, J es_ES
dc.contributor.author Elena Fito, Santiago F. es_ES
dc.contributor.author Borodynko-Filas, N. es_ES
dc.contributor.author Rubis, B. es_ES
dc.contributor.author Hasiów-Jaroszewska, B. es_ES
dc.date.accessioned 2018-06-08T04:33:05Z
dc.date.available 2018-06-08T04:33:05Z
dc.date.issued 2017 es_ES
dc.identifier.issn 1471-2148 es_ES
dc.identifier.uri http://hdl.handle.net/10251/103636
dc.description.abstract [EN] Pepino mosaic virus (PepMV) is an emerging plant pathogen that infects tomatoes worldwide. Understanding the factors that influence its evolutionary success is essential for developing new control strategies that may be more robust against the evolution of new viral strains. One of these evolutionary factors is the distribution of mutational fitness effect (DMFE), that is, the fraction of mutations that are lethal, deleterious, neutral, and beneficial on a given viral strain and host species. The goal of this study was to characterize the DMFE of introduced nonsynonymous mutations on a mild isolate of PepMV from the Chilean 2 strain (PepMV-P22). Additionally, we also explored whether the fitness effect of a given mutation depends on the gene where it appears or on epistatic interactions with the genetic background. To address this latter possibility, a subset of mutations were also introduced in a mild isolate of the European strain (PepMV-P11) and the fitness of the resulting clones measured. es_ES
dc.description.sponsorship This study was financially supported by grant 2011/01/D/NZ9/00279, from the Poland National Science Center, to B.H.J and by grants BFU2015-65037-P, from Spain Ministry of Economy and Competitiveness-FEDER, and PROMETEOII/2014/021, from Generalitat Valenciana, to S.F.E. en_EN
dc.language Inglés es_ES
dc.publisher Springer (Biomed Central Ltd.) es_ES
dc.relation.ispartof BMC Evolutionary Biology es_ES
dc.rights Reconocimiento (by) es_ES
dc.subject Epistasis es_ES
dc.subject Mutational fitness effect es_ES
dc.subject Pepino mosaic virus es_ES
dc.subject Real-time quantitative PCR es_ES
dc.subject Site-directed mutagenesis es_ES
dc.subject Virus accumulation es_ES
dc.subject Virus evolution es_ES
dc.title Strain-dependent mutational effects for Pepino mosaic virus in a natural host es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1186/s12862-017-0920-4 es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MINECO//BFU2015-65037-P/ES/EVOLUCION DE VIRUS EN HUESPEDES CON SUSCEPTIBILIDAD VARIABLE: CONSECUENCIAS EN EFICACIA Y VIRULENCIA DE CAMBIOS EN LAS REDES INTERACTOMICAS DE PROTEINAS VIRUS-HUESPED/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//PROMETEOII%2F2014%2F021/ES/Comparative systems biology of host-virus interactions/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes es_ES
dc.description.bibliographicCitation Minicka, J.; Elena Fito, SF.; Borodynko-Filas, N.; Rubis, B.; Hasiów-Jaroszewska, B. (2017). Strain-dependent mutational effects for Pepino mosaic virus in a natural host. BMC Evolutionary Biology. 17:1-11. https://doi.org/10.1186/s12862-017-0920-4 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1186/s12862-017-0920-4 es_ES
dc.description.upvformatpinicio 1 es_ES
dc.description.upvformatpfin 11 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 17 es_ES
dc.identifier.pmid 28264646 en_EN
dc.identifier.pmcid PMC5339997 en_EN
dc.relation.pasarela S\339116 es_ES
dc.contributor.funder Generalitat Valenciana es_ES
dc.contributor.funder Ministerio de Economía, Industria y Competitividad es_ES
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