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dc.contributor.author | Hernandez-De Diego, Rafael | es_ES |
dc.contributor.author | Tarazona Campos, Sonia | es_ES |
dc.contributor.author | Martínez-Mira, Carlos | es_ES |
dc.contributor.author | Balzano-Nogueira, Leandro | es_ES |
dc.contributor.author | Furió-Tarí, Pedro | es_ES |
dc.contributor.author | Conesa, A. | es_ES |
dc.contributor.author | Pappas, G. | es_ES |
dc.date.accessioned | 2019-06-07T20:05:46Z | |
dc.date.available | 2019-06-07T20:05:46Z | |
dc.date.issued | 2018 | es_ES |
dc.identifier.issn | 0305-1048 | es_ES |
dc.identifier.uri | http://hdl.handle.net/10251/121774 | |
dc.description.abstract | [EN] The increasing availability of multi-omic platforms poses new challenges to data analysis. Joint visualization of multi-omics data is instrumental in better understanding interconnections across molecular layers and in fully utilizing the multi-omic resources available to make biological discoveries. We present here PaintOmics 3, a web-based resource for the integrated visualization of multiple omic data types onto KEGG pathway diagrams. PaintOmics 3 combines server-end capabilities for data analysis with the potential of modern web resources for data visualization, providing researchers with a powerful framework for interactive exploration of their multi-omics information. Unlike other visualization tools, PaintOmics 3 covers a comprehensive pathway analysis workflow, including automatic feature name/identifier conversion, multi-layered feature matching, pathway enrichment, network analysis, interactive heatmaps, trend charts, and more. It accepts a wide variety of omic types, including transcriptomics, proteomics and metabolomics, as well as region-based approaches such as ATAC-seq or ChIP-seq data. The tool is freely available at www.paintomics.org | es_ES |
dc.description.sponsorship | European Union Seventh Framework Programme [FP7/2007-2013] under the grant agreement [306000-STATegra]; Marie Curie International Research Staff Exchange Scheme under grant agreement [612583-DEANN]; Spanish MINECO [BIO2012-40244]. INB Grant [PT17/0009/0015 - ISCIII-SGEFI / ERDF]. Funding for open access charge: MINECO [BIO2012-40244]. | es_ES |
dc.language | Inglés | es_ES |
dc.publisher | Oxford University Press | es_ES |
dc.relation.ispartof | Nucleic Acids Research | es_ES |
dc.rights | Reconocimiento - No comercial (by-nc) | es_ES |
dc.subject.classification | ESTADISTICA E INVESTIGACION OPERATIVA | es_ES |
dc.title | PaintOmics 3: a web resource for the pathway analysis and visualization of multi-omics data | es_ES |
dc.type | Artículo | es_ES |
dc.identifier.doi | 10.1093/nar/gky466 | es_ES |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/FP7/306000/EU/User-driven Development of Statistical Methods for Experimental Planning, Data Gathering, and Integrative Analysis of Next Generation Sequencing, Proteomics and Metabolomics data/ | es_ES |
dc.relation.projectID | info:eu-repo/grantAgreement/ISCIII//PT17%2F0009%2F0015/ | es_ES |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/FP7/612583/EU/Developing an European American NGS Network/ | es_ES |
dc.relation.projectID | info:eu-repo/grantAgreement/MINECO//BIO2012-40244/ES/DESARROLLO DE RECURSOS COMPUTACIONALES PARA LA CARACTERIZACION Y ANOTACION FUNCIONAL DE ARN NO CODIFICANTE./ | es_ES |
dc.rights.accessRights | Abierto | es_ES |
dc.contributor.affiliation | Universitat Politècnica de València. Departamento de Estadística e Investigación Operativa Aplicadas y Calidad - Departament d'Estadística i Investigació Operativa Aplicades i Qualitat | es_ES |
dc.description.bibliographicCitation | Hernandez-De Diego, R.; Tarazona Campos, S.; Martínez-Mira, C.; Balzano-Nogueira, L.; Furió-Tarí, P.; Conesa, A.; Pappas, G. (2018). PaintOmics 3: a web resource for the pathway analysis and visualization of multi-omics data. Nucleic Acids Research. 46(W1):503-509. https://doi.org/10.1093/nar/gky466 | es_ES |
dc.description.accrualMethod | S | es_ES |
dc.relation.publisherversion | http://doi.org/10.1093/nar/gky466 | es_ES |
dc.description.upvformatpinicio | 503 | es_ES |
dc.description.upvformatpfin | 509 | es_ES |
dc.type.version | info:eu-repo/semantics/publishedVersion | es_ES |
dc.description.volume | 46 | es_ES |
dc.description.issue | W1 | es_ES |
dc.identifier.pmid | 29800320 | |
dc.identifier.pmcid | PMC6030972 | es_ES |
dc.relation.pasarela | S\366528 | es_ES |
dc.contributor.funder | European Commission | es_ES |
dc.contributor.funder | Ministerio de Economía y Competitividad | es_ES |
dc.contributor.funder | Instituto de Salud Carlos III | es_ES |