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High-throughput amplicon sequencing-based analysis of active fungal communities inhabiting grapevine after hot-water treatments reveals unexpectedly high fungal diversity

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High-throughput amplicon sequencing-based analysis of active fungal communities inhabiting grapevine after hot-water treatments reveals unexpectedly high fungal diversity

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Eichmeier, A.; Pecenka, J.; Penazova, E.; Baranek, M.; Català, S.; León Santana, M.; Armengol Fortí, J.... (2018). High-throughput amplicon sequencing-based analysis of active fungal communities inhabiting grapevine after hot-water treatments reveals unexpectedly high fungal diversity. Fungal Ecology. 36:26-38. https://doi.org/10.1016/j.funeco.2018.07.011

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Title: High-throughput amplicon sequencing-based analysis of active fungal communities inhabiting grapevine after hot-water treatments reveals unexpectedly high fungal diversity
Author: Eichmeier, A. Pecenka, J. Penazova, E. Baranek, M. Català, Santiago León Santana, Maela Armengol Fortí, Josep Gramaje Pérez, David
UPV Unit: Universitat Politècnica de València. Departamento de Ecosistemas Agroforestales - Departament d'Ecosistemes Agroforestals
Universitat Politècnica de València. Instituto Agroforestal Mediterráneo - Institut Agroforestal Mediterrani
Issued date:
Abstract:
[EN] The ecology of total fungal communities in grapevine is so far largely derived from studies on culture-dependent methods or cultivation-independent rDNA approaches. Sequencing the ribosomal RNA transcripts (rRNA) would ...[+]
Subjects: Endophytic fungi , Grapevine trunk diseases , ITS2 , Metatranscriptomics , Mycobiota , NGS , Plant microbiome
Copyrigths: Reconocimiento - No comercial - Sin obra derivada (by-nc-nd)
Source:
Fungal Ecology. (issn: 1754-5048 )
DOI: 10.1016/j.funeco.2018.07.011
Publisher:
Elsevier
Publisher version: http://doi.org/10.1016/j.funeco.2018.07.011
Project ID:
info:eu-repo/grantAgreement/MSMT//CZ.02.1.01%2F0.0%2F0.0%2F16_025%2F0007314/
info:eu-repo/grantAgreement/MSMT//LM2015042/CZ/E-infrastruktura CESNET/
Thanks:
This work was supported by Projects No. LD14051 from the Ministry of Education, Youth and Sports, Czech Republic covered by COST Action FA1303, and No. CZ.02.1.01/0.0/0.0/16_025/0007314 "Multidisciplinary research to ...[+]
Type: Artículo

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