- -

Polyvalent detection of twelve viruses and four viroids affecting tomato by using a unique polyprobe

RiuNet: Institutional repository of the Polithecnic University of Valencia

Share/Send to

Cited by

Statistics

  • Estadisticas de Uso

Polyvalent detection of twelve viruses and four viroids affecting tomato by using a unique polyprobe

Show full item record

Sanchez Navarro, JA.; Corachán Valencia, L.; Font San Ambrosio, MI.; Alfaro Fernández, AO.; Pallás Benet, V. (2019). Polyvalent detection of twelve viruses and four viroids affecting tomato by using a unique polyprobe. European Journal of Plant Pathology. 155(1):361-368. https://doi.org/10.1007/s10658-019-01763-6

Por favor, use este identificador para citar o enlazar este ítem: http://hdl.handle.net/10251/158295

Files in this item

Item Metadata

Title: Polyvalent detection of twelve viruses and four viroids affecting tomato by using a unique polyprobe
Author: SANCHEZ NAVARRO, JESUS ANGEL Corachán Valencia, Lorena Font San Ambrosio, Maria Isabel Alfaro Fernández, Ana Olvido Pallás Benet, Vicente
UPV Unit: Universitat Politècnica de València. Departamento de Ecosistemas Agroforestales - Departament d'Ecosistemes Agroforestals
Universitat Politècnica de València. Instituto Agroforestal Mediterráneo - Institut Agroforestal Mediterrani
Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes
Issued date:
Abstract:
[EN] Non-radioactive molecular hybridization represents an attractive approach for the detection of multiple plant virus and/or viroids and a good alternative to the more extended serological and PCR-based detection methods. ...[+]
Subjects: Multiplex , Non-radioactive molecular hybridization , Tomato viruses and viroids , Dig-RNA probe , Seed
Copyrigths: Cerrado
Source:
European Journal of Plant Pathology. (issn: 0929-1873 )
DOI: 10.1007/s10658-019-01763-6
Publisher:
Springer-Verlag
Publisher version: https://doi.org/10.1007/s10658-019-01763-6
Project ID:
info:eu-repo/grantAgreement/GVA//PROMETEO%2F2015%2F010/ES/Interacciones RNA-proteína y proteína-proteína en procesos de desarrollo y patogénesis mediados por virus y agentes subvirales en cultivos de interés Agronómico (RNAPROT)/
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/BIO2017-88321-R/ES/DESCRIFRANDO INTERACCIONES VIRUS-PLANTA ESENCIALES PARA LA SUSCEPTIBILIDAD Y%2FO RESISTENCIA EN DOS PATOSISTEMAS AGRONOMICAMENTE RELEVANTES/
Thanks:
This work was supported by grant BIO2017-88321-R from the Spanish Direccion General de Investigacion Cientifica y Tecnica (DGICYT) and the Prometeo Program GV2015/010 from the Generalitat Valenciana.
Type: Artículo

References

Aparicio, F., Soler, S., Aramburu, J., Galipienso, L., Nuez, F., Pallás, V., & López, C. (2009). Simultaneous detection of six RNA plant viruses affecting tomato crops using a single digoxigenin-labelled polyprobe. European Journal of Plant Pathology, 123, 117–123.

Brunt, A. A., Crabtree, K., Dallwitz, M. J., Gibbs, A. J., Watson, L., & Zurcher, E. J. (1996). Plant viruses online. Descriptions and lists from the VIDE database. Wallingford, UK: CAB International.

Clark, M. F., & Adams, A. N. (1977). Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses. Journal of General Virology, 34, 475–483. [+]
Aparicio, F., Soler, S., Aramburu, J., Galipienso, L., Nuez, F., Pallás, V., & López, C. (2009). Simultaneous detection of six RNA plant viruses affecting tomato crops using a single digoxigenin-labelled polyprobe. European Journal of Plant Pathology, 123, 117–123.

Brunt, A. A., Crabtree, K., Dallwitz, M. J., Gibbs, A. J., Watson, L., & Zurcher, E. J. (1996). Plant viruses online. Descriptions and lists from the VIDE database. Wallingford, UK: CAB International.

Clark, M. F., & Adams, A. N. (1977). Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses. Journal of General Virology, 34, 475–483.

Cohen, J. (1960). A coefficient of agreement for nominal scales. Educational and Psychological Measurement, 20, 37–46.

Cohen, O., Batuman, O., Stanbekova, G., Sano, T., Mawassi, M., & Bar-Joseph, M. (2006). Construction of a multiprobe for the simultaneous detection of viroids infecting citrus trees. Virus Genes, 33, 287–292.

Guo, K. J., & Bowden, D. S. (1991). Digoxigenin-labeled probes for the detection of hepatitis B virus DNA in serum. Journal of Clinical Microbiology, 29(3), 506–509.

Herranz, M. C., Sánchez-Navarro, J. A., Aparicio, F., & Pallás, V. (2005). Simultaneous detection of six stone fruit viruses by non-isotopic molecular hybridization using a unique riboprobe or ‘polyprobe’. Journal of Virological Methods, 124, 49–55.

James, D., Varga, A., Pallas, V., & Candresse, T. (2006). Strategies for simultaneous detection of multiple plant viruses. Canadian Journal of Plant Pathology-Revue Canadienne De Phytopathologie, 28, 16–29.

Ling, K. S., & Zhang, W. (2009). First report of a natural infection by Mexican papita viroid and tomato chlorotic dwarf viroid on greenhouse tomatoes in Mexico. Plant Disease, 93, 1216–1216.

Ling, K.-S., Wechter, W. P., & Jordan, R. (2007). Development of a one-step immunocapture real-time TaqMan RT-PCR assay for the broad spectrum detection of Pepino mosaic virus. Journal of Virological Methods, 144, 65–72.

Lopez, M. M., Bertolini, E., Olmos, A., Caruso, P., Gorris, M. T., Llop, P., Penyalver, R., & Cambra, M. (2003). Innovative tools for detection of plant pathogenic viruses and bacteria. International Microbiology, 6, 233–243.

MacKenzie, D. J., McLean, M. A., Mukerji, S., & Green, M. (1997). Improved RNA extraction from woody plants for the detection of viral pathogens by reverse transcription-polymerase chain reaction. Plant Disease, 81, 222–226.

Más, P., Sánchez-Navarro, J. A., Sánchez-Pina, M. A., & Pallás, V. (1993). Chemiluminescent and colorigenic detection of cherry leaf roll virus with digoxigenin-labeled RNA probes. Journal of Virological Methods, 45, 93–102.

Olmos, A., Capote, N., Bertolini, E., & Cambra, M. (2007). Molecular diagnostic methods for plant viruses. In Z. K. Punja, S. H. De Boer, & H. Sanfaçon (Eds.), Biotechnology and plant disease management (pp. 227–249). Wallingford, UK and Cambridge, USA: CAB International.

Pallás, V., Más, P., & Sánchez-Navarro, J. A. (1998). Detection of plant RNA viruses by nonisotopic dot-blot hybridization. In G. Foster & S. Taylor (Eds.), Plant virology protocols (Vol. 81, pp. 461–468). Totowa, NJ: Humana Press.

Pallás, V., Sánchez-Navarro, J. A., & James, D. (2018). Recent advances on the multiplex molecular detection of plant viruses and Viroids. Frontiers in Microbiology, 9, 2087.

Peiró, A., Pallás, V., & Sánchez-Navarro, J. A. (2012). Simultaneous detection of eight viruses and two viroids affecting stone fruit trees by using a unique polyprobe. European Journal of Plant Pathology, 132, 469–475.

Saade, M., Aparicio, F., Sánchez-Navarro, J. A., Herranz, M. C., Myrta, A., Di Terlizzi, B., & Pallás, V. (2000). Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridization and multiplex reverse-transcription polymerase chain reaction. Phytopathology, 90, 1330–1336.

Sakamoto, H., Lemaire, O., Merdinoglu, D., & Guesdon, J. L. (1989). Comparison of enzyme-linked immunosorbent assay (ELISA) with dot hybridization using 32P- or 2-acetylaminofluorene (AAF)-labelled cDNA probes for the detection and characterization of beet necrotic yellow vein virus. Molecular and Cellular Probes, 3(2), 159–166.

Saldarelli, P., Barbarossa, L., Grieco, F., & Gallitelli, D. (1996). Digoxigenin-labeled riboprobes applied to phytosanitary certification of tomato in Italy. Plant Disease, 80, 1343–1346.

Sánchez-Navarro, J. A., Cano, E. A., & Pallás, V. (1996). Non-radioactive molecular hybridization detection of carnation mottle virus in infected carnations and its comparison to serological and biological techniques. Plant Pathology, 45, 375–382.

Sánchez-Navarro, J. A., Aparicio, F., Rowhani, A., & Pallás, V. (1998). Comparative analysis of ELISA, nonradioactive molecular hybridization and PCR for the detection of Prunus necrotic ringspot virus in herbaceous and Prunus hosts. Plant Pathology, 47, 780–786.

Sánchez-Navarro, J. A., Cañizares, M. C., Cano, E. A., & Pallás, V. (1999). Simultaneous detection of five carnation viruses by non-isotopic molecular hybridization. Journal of Virological Methods, 82, 167–175.

Sánchez-Navarro, J. A., Cañizares, M. C., Cano, E. A., & Pallás, V. (2007). Plant tissue distribution and chemical inactivation of six carnation viruses. Crop Protection, 26, 1049–1054.

Sánchez-Navarro, J. A., Cooper, C. N., & Pallás, V. (2018). Polyvalent detection of members of the genus Potyvirus by molecular hybridization using a genus-probe. Phytopathology, 108, 1522–1529.

Zamora-Macorra, E. J., Ochoa-Martinez, D. L., Valdovinos-Ponce, G., Rojas-Martínez, R., Ramirez-Rojas, S., Sánchez-Navarro, J. A., Pallás, V., & Aparicio, F. (2015). Simultaneous detection of Clavibacter michiganensis subsp michiganensis, Pepino mosaic virus and Mexican papita viroid by non-radioactive molecular hybridization using a unique polyprobe. European Journal of Plant Pathology, 143, 779–787.

[-]

recommendations

 

This item appears in the following Collection(s)

Show full item record