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Pseudonocardia filamentous bulking sludge in an industrial wastewater treatment plant as revealed by Illumina amplicon sequencing

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Pseudonocardia filamentous bulking sludge in an industrial wastewater treatment plant as revealed by Illumina amplicon sequencing

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dc.contributor.author Alonso Molina, José Luís es_ES
dc.contributor.author Soler, A. es_ES
dc.contributor.author Moreno-Mesonero, L. es_ES
dc.contributor.author Rodríguez, E. es_ES
dc.contributor.author Infante, P. es_ES
dc.date.accessioned 2021-02-17T04:31:59Z
dc.date.available 2021-02-17T04:31:59Z
dc.date.issued 2020-10-02 es_ES
dc.identifier.issn 1735-1472 es_ES
dc.identifier.uri http://hdl.handle.net/10251/161600
dc.description.abstract [EN] In this study, 16S rRNA gene amplicon sequencing was performed to identify bulking filamentous bacteria in an industrial wastewater treatment plant that threats effluents of bioethanol production process from cereal cooking. The presence of Pseudonocardia sp. was confirmed by comparing the 16SrRNA of the most abundantly amplified sequence (OTU; 12.35%) with corresponding nucleotides present in two genomic databases. The Pseudonocardia species identified was closely related to Pseudonocardia spinosa. Over 50 different types of filamentous microorganisms have been found to cause problems with bulking and foaming, but Pseudonocardia has, until now, not been described to be among them. In addition, the 16S rRNA dataset was analyzed to reveal bacterial community composition during sludge bulking. Candidatus Competibacter was identified as the second most abundant sequence (OTU, 10.04%). Comparative data from samples obtained before and after appearance of Pseudonocardia suggest that a decrease in nutrients could be one of the main factors affecting sludge bulking generated by this species. The outcomes of this study are expected to provide an important insight into the role of Pseudonocardia in bulking in industrial wastewater treatment plants. es_ES
dc.language Inglés es_ES
dc.publisher Springer-Verlag es_ES
dc.relation.ispartof International Journal of Environmental Science and Technology es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject A2 es_ES
dc.subject O process es_ES
dc.subject Fluorescence in situ hybridization es_ES
dc.subject Illumina sequencing es_ES
dc.subject Nocardioform bacteria es_ES
dc.title Pseudonocardia filamentous bulking sludge in an industrial wastewater treatment plant as revealed by Illumina amplicon sequencing es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1007/s13762-020-02759-0 es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario de Ingeniería del Agua y del Medio Ambiente - Institut Universitari d'Enginyeria de l'Aigua i Medi Ambient es_ES
dc.description.bibliographicCitation Alonso Molina, JL.; Soler, A.; Moreno-Mesonero, L.; Rodríguez, E.; Infante, P. (2020). Pseudonocardia filamentous bulking sludge in an industrial wastewater treatment plant as revealed by Illumina amplicon sequencing. International Journal of Environmental Science and Technology. 17(10):4149-4160. https://doi.org/10.1007/s13762-020-02759-0 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1007/s13762-020-02759-0 es_ES
dc.description.upvformatpinicio 4149 es_ES
dc.description.upvformatpfin 4160 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 17 es_ES
dc.description.issue 10 es_ES
dc.relation.pasarela S\417964 es_ES
dc.description.references Alonso JL, Cuesta G, Ramírez GW, Morenilla JJ, Bernácer I, Lloret RM (2009) Manual de técnicas avanzadas para la identificación y control de bacterias filamentosas. Epsar Generalitat Valenciana, Spain es_ES
dc.description.references APHA (2005) Standard methods for the examination of water and wastewater, 21st edn. American Public Health Association, Baltimore es_ES
dc.description.references Bjornsson L, Hugenholtz P, Tyson GW, Blackall LL (2002) Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal. Microbiology 148:2309–2318 es_ES
dc.description.references Capello S, Volta A, Santisi S, Morici C, Mancini G, Quatrini P, Genovese M, Yakimov MM, Torregrosa M (2016) Oil-degrading bacteria from a membrane bio-reactor (BF-MBR) system for treatment of saline oily waste: isolation, identification and characterization of the biotechnological potential. Int Biodegrad 110:235–244 es_ES
dc.description.references Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walter WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7:335–336 es_ES
dc.description.references Chen Z, Lei X, Lai Q, Li Y, Zhang B, Zhang J, Yang L, Zheng W, Tian Y, Yu Z, Xu H, Zheng T (2014) Phaedactylibacter xiamenesis gen. nov., sp. Nov., a member of the family Saprospiracaeae isolated from the marine alga Phaedactylum tricornutum. Int J Syst Evol Microbiol 64:3496–3502 es_ES
dc.description.references Cuesta G, Soler A, Alonso JL, Ruvira MA, Lucena T, Arahal DR, Goodfellow M (2013) Pseudonocardia hispaniensis sp. nov., a novel actinomycete isolated from industrial wastewater activated sludge. Antonie Leeuwenhoek 103:135–142 es_ES
dc.description.references Cydzik-Kwiatkowska A, Zielinska M (2016) Bacterial communities in full-scale wastewater treatment systems. World J Microbiol Biotechnol 32:66. https://doi.org/10.1007/s11274-016-2012-9 es_ES
dc.description.references Dunkel T, de León Gallegos L, Bock C, Lange A, Hoffman D, Boenigk J, Denecke M (2018) Illumina sequencing for the identification of filamentous bulking and foaming in industrial activated sludge plants. Int J Environ Sci Technol 15:1139–1158 es_ES
dc.description.references Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460–2461 es_ES
dc.description.references Eikelboom DH (2000) Process control of activated sludge plants by microscopic investigation. IWA Publishing, London es_ES
dc.description.references Eikelboom DH (2006) Identification and control of microorganisms in industrial wastewater treatment plants. IWA Publishing, London es_ES
dc.description.references Eikelboom DH, Geirkink B (2002) Filamentous micro-organisms observed in industrial activated sludge plants. Water Sci Technol 46(1–2):535–542 es_ES
dc.description.references Felsenstein J (1993) PHYLIP (Phylogenetic Inference Package), version 3.5c. Department of Genetics, University of Washington, Seattle es_ES
dc.description.references Guo F, Zhang T (2012) Profiling bulking and foaming bacteria in activated sludge by high throughput sequencing. Water Res 46:2772–2782 es_ES
dc.description.references Hu M, Wang X, Weng X, Xia Y (2012) Microbial community structures in different wastewater treatment plants as revealed by 454-pyrosequencing analysis. Bioresour Technol 117:72–79 es_ES
dc.description.references Jenkins D, Richard MG, Daigger GT (1993) Manual on the causes and control of activated sludge bulking and foaming. Lewis Publishers Inc, Chelsea es_ES
dc.description.references Jenkins D, Richard MG, Daigger GT (2004) Manual on the causes and control of activated sludge bulking, foaming and other solid separation problems, 3rd edn. IWA publishing, London es_ES
dc.description.references Ju F, Zhang T (2015) Bacterial assembly and temporal dynamics in activated sludge of a full-scale municipal wastewater treatment plant. ISME J 9:683–695 es_ES
dc.description.references Kragelund C, Levantesi C, Borge A, Thelen K, Eikelboom D, Tandoi V, Kong Y, van der Waaarde J, Krooneman J, Rossetti S, Thomsen TR, Nielsen PH (2006) Identity, abundance and ecophysiology of filamentous Chloroflexi species present in activated sludge treatment plants. FEMS Microbiol Ecol 59:671–682 es_ES
dc.description.references Kragelund C, Levantesi C, Borger A, Thelen K, Eikelboom D, Tandoi V, Kong Y, Krooneman J, Larsen P, Thomsen TR, Nielsen PH (2008) Identity, abundance and ecophysiology of filamentous bacteria belonging to the Bacteroidetes present in activated sludge plants. Microbiology 154:886–894 es_ES
dc.description.references Luján-Facundo MJ, Fernández-Navarro J, Alonso-Molina JL, Amorós-Muñoz I, Moreno Y, Mendoza-Roca JA, Pastor-Alcañiz L (2018) The role of salinity on the changes of the biomass characteristics and on the performance of an OMBR treating tannery wastewater. Water Res 142:129–137 es_ES
dc.description.references Mahendra S, Alvarez-Cohen L (2005) Pseudonocardia dioxanivorans sp. nov., a novel actinomycete that grows on 1,4-dioxane. Int J Syst Evol Microbiol 55:593–598 es_ES
dc.description.references Manz W, Amann R, Ludwig W, Wagner M, Schleifer K-H (1992) Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: Problems and Solutions. Syst Appl Microbiol 15:593–600 es_ES
dc.description.references Martins AMP, Pagilla K, Heijnen JJ, van Loosdrecht M (2004) Filamentous bulking sludge, a critical review. Water Res 38:793–817 es_ES
dc.description.references Martins J, Peixe L, Vasconcelos VM (2011) Unraveling Cyanobacteria ecology in wastewater treatment plants (WWTP). Microb Ecol 62:241–256 es_ES
dc.description.references Mielczarek AT, Kragelund C, Eriksen PS, Nielsen PH (2012) Population dynamics of filamentous bacteria in Danish wastewater treatment plants with nutrient removal. Water Res 46:3781–3795 es_ES
dc.description.references Nielsen PH, Kragelund C, Seviour RJ, Nielsen JL (2009) Identity and ecophysiology of filamentous bacteria in activated sludge. FEMS Microbiol Rev 33:969–998 es_ES
dc.description.references Nierychlo M, Milobedzka A, Petriglieri F, McIlroy B, Nielsen PH, McIllroy SJ (2019) The morphology and metabolic potential of the Chloroflexi in full-scale activated sludge wastewater treatment plants. FEMS Mcicrobiol Ecol 95:1–11 es_ES
dc.description.references Nittami T, Speiers LBM, Yamada T, Suzuki I, Fukuda J, Kurisu F, Seviour RJ (2017) Quantification of Chloroflexi Eikelboom morphotype 1851 for prediction and control of bulking events in municipal activated sludge plants in Japan. Appl Microbiol Biotechnol 101(9):3861–3869 es_ES
dc.description.references Nittami T, Shoji T, Koshiba Y, Noguchi M, Oshiki M, Kuroda M, Kindaichi T, Fukuda J, Kurisu F (2019) Investigation of prospective factors that control Kouleothrix (Type 1851) filamentous bacterial abundance and their correlation with sludge settleability in full-scale wastewater treatment plants. Process Saf Environ 124:137–142 es_ES
dc.description.references Park KS, Ki C-S, Kang C-I, Kim Y-J, Chung DR, Peck KR, Song J-H, Lee NY (2012) Evaluation of the GenBank, EzTxon, and BIBI services for molecular identification of clinical blood culture isolates that were unidentifiable or misidentified by conventional methods. J Clin Microbiol 50:1792–1795 es_ES
dc.description.references Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, Peplies J, Glöckner FO (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucl Acids Res 41(D1):D590–D596 es_ES
dc.description.references Saitou N, Nei M (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425 es_ES
dc.description.references Salvadó H (2016) Improvement of the intersection method for the quantification of filamentous organisms: basis and practice for bulking and foaming bioindication purposes. Water Sci Technol 74:1274–1282 es_ES
dc.description.references Saunders AM, Albertsen M, Vollertsen J, Nielsen PH (2016) The activated sludge ecosystem contains a core community of abundant organisms. ISME J 10:11–20 es_ES
dc.description.references Schuppler M, Wagner M, Schon G, Gobel UB (1998) In situ identification of nocardioform actinomycetes in activated sludge using fluorescent rRNA-targeted oligonucleotide probes. Microbiology 144:249–259 es_ES
dc.description.references Seviour RJ, Kragelund C, Kong Y, Eales K, Nielsen JL, Nielsen PH (2008) Ecophysiology of the actinobacteria in activated sludge systems. Antonie Van Leeuwenhoek 94:21–33 es_ES
dc.description.references Szeinbaum N, Erijman L (2007) Identificación molecular de Pseudonocardia sp. Como bacteria responsable de bulking filamentoso en una planta de tratamiento de efluentes industriales. Ingeniería Sanitaria y Ambiental 95:85–89 es_ES
dc.description.references Takahashi S, Tomita J, Nishika K, Hisada T, Nishijima M (2014) Development of a prokaryotic universal primer for simultaneous analysis of Bacteria and Archaea using next-generation sequencing. PLoS One. https://doi.org/10.1371/journal.pone.0105592 es_ES
dc.description.references Thomsen TR, Blackall LL, de Muro MA, Nielsen JL, Nielsen PH (2006) Meganema perideroedes gen. nov., a filamentous alphaproteobacterium from activated sludge. Int J Syst Evol Microbiol 56:1865–1868 es_ES
dc.description.references Vainberg S, McClay K, Masuda H, Root D, Condee C, Zylstra GJ, Steffan RJ (2006) Biodegradation of ether pollutants by Pseudonocardia sp. Strain ENV478. Appl Environ Microbiol 72:5218–5224 es_ES
dc.description.references Van de Peer Y, De Wachter R (1994) TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft windows environment. Comput Appl Biosci 10:569–570 es_ES
dc.description.references Van der Waarde J, Krooneman J, Krooneman J, Geurkink B, van der Werf A, Eikelboom D, Eikelboom D, Beimfohr C, Snaidr J, Levantesi C, Tandoi V (2002) Molecular monitoring of bulking sludge in industrial wastewater treatment plants. Water Sci Technol 46(1-2):551–558 es_ES
dc.description.references Vervaeren H, De Wilde K, Matthys J, Boon N, Raskin L, Verstraete W (2005) Quantification of an Eikelboom type 021 N bulking event with fluorescence in situ hybridization and real-time PCR. Appl Microbiol Biotechnol 68:695–704 es_ES
dc.description.references Wang P, Yu Z, Qi R, Zhang H (2016) Detailed comparison of bacterial communities during seasonal sludge bulking in a municipal wastewater treatment plant. Water Res 105:157–166 es_ES
dc.description.references Wanner J, Kragelund C, Nielsen PH (2010) Microbiology of bulking. In: Seviour R, Nielsen PH (eds) Microbial ecology of activated sludge. IWA Publishing, London, pp 191–214 es_ES
dc.description.references Xia Y, Kong Y, Thomsen TR, Nielsen PH (2008) Identification and ecophysiological characterization of epiphytic protein-hydrolyzing Saprospiraceae (“Candidatus Epiflobacter” spp.) in activated sludge. Appl Environ Microbiol 74:2229–2238 es_ES
dc.description.references Ye L, Zhang T (2013) Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16SrDNA pyrosequencing. Appl Microbiol Biotechnol 97:2681–2690 es_ES
dc.description.references Yoon SH, Ha SM, Kwon S, Lim J, Kim Y, Seo H, Chun J (2017) Introducing EzBioCloud: a taxonomically united database of 16S rRNA and whole genome assemblies. Int J Syst Evol Microbiol 67:1613–1617 es_ES
dc.description.references Zhang T, Shao MF, Ye L (2012) 454 pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants. ISME J 6:1137–1147 es_ES
dc.description.references Zhang D-F, Jiang Z, Li L, Liu B-B, Zhang Z-M, Tian X-P, Zhang S, Li W-J (2014) Pseudonocardia sediminis sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol 64:745–750 es_ES
dc.description.references Zhang M, Yao J, Wang X, Hong Y, Chen Y (2019) The microbial community in filamentous bulking sludge with the ultra-low sludge loading and long sludge retention time in oxidation ditch. Sci Rep 9:13693. https://doi.org/10.1038/s41598-019-50086-3 es_ES
dc.description.references Zhou S, Wei CH, Liao CD, Wu HZ (2010) Comprehensive study on dynamics of microbial community in Anaerobic-Oxic-Oxic process using PCR-DGGE, gas chromatography analysis, and dehydrogenase activity assays. World J Microbiol Technol 26:273–279 es_ES


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