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Standardizing Single-Frame Phase Singularity Identification Algorithms and Parameters in Phase Mapping During Human Atrial Fibrillation

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Standardizing Single-Frame Phase Singularity Identification Algorithms and Parameters in Phase Mapping During Human Atrial Fibrillation

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dc.contributor.author Li, Xin es_ES
dc.contributor.author Almeida, Tiago P. es_ES
dc.contributor.author Dastagir, Nawshin es_ES
dc.contributor.author Guillem Sánchez, María Salud es_ES
dc.contributor.author Salinet, Joao es_ES
dc.contributor.author Chu, Gavin S. es_ES
dc.contributor.author Stafford, Peter J. es_ES
dc.contributor.author Schlindwein, Fernando S. es_ES
dc.contributor.author Ng, G. André es_ES
dc.date.accessioned 2021-05-07T03:32:23Z
dc.date.available 2021-05-07T03:32:23Z
dc.date.issued 2020-07-21 es_ES
dc.identifier.issn 1664-042X es_ES
dc.identifier.uri http://hdl.handle.net/10251/166060
dc.description.abstract [EN] Purpose Recent investigations failed to reproduce the positive rotor-guided ablation outcomes shown by initial studies for treating persistent atrial fibrillation (persAF). Phase singularity (PS) is an important feature for AF driver detection, but algorithms for automated PS identification differ. We aim to investigate the performance of four different techniques for automated PS detection. Methods 2048-channel virtual electrogram (VEGM) and electrocardiogram signals were collected for 30 s from 10 patients undergoing persAF ablation. QRST-subtraction was performed and VEGMs were processed using sinusoidal wavelet reconstruction. The phase was obtained using Hilbert transform. PSs were detected using four algorithms: (1) 2D image processing based and neighbor-indexing algorithm; (2) 3D neighbor-indexing algorithm; (3) 2D kernel convolutional algorithm estimating topological charge; (4) topological charge estimation on 3D mesh. PS annotations were compared using the structural similarity index (SSIM) and Pearson's correlation coefficient (CORR). Optimized parameters to improve detection accuracy were found for all four algorithms usingF(beta)score and 10-fold cross-validation compared with manual annotation. Local clustering with density-based spatial clustering of applications with noise (DBSCAN) was proposed to improve algorithms 3 and 4. Results The PS density maps created by each algorithm with default parameters were poorly correlated. Phase gradient threshold and search radius (or kernels) were shown to affect PS detections. The processing times for the algorithms were significantly different (p< 0.0001). TheF(beta)scores for algorithms 1, 2, 3, 3 + DBSCAN, 4 and 4 + DBSCAN were 0.547, 0.645, 0.742, 0.828, 0.656, and 0.831. Algorithm 4 + DBSCAN achieved the best classification performance with acceptable processing time (2.0 +/- 0.3 s). Conclusion AF driver identification is dependent on the PS detection algorithms and their parameters, which could explain some of the inconsistencies in rotor-guided ablation outcomes in different studies. For 3D triangulated meshes, algorithm 4 + DBSCAN with optimal parameters was the best solution for real-time, automated PS detection due to accuracy and speed. Similarly, algorithm 3 + DBSCAN with optimal parameters is preferred for uniform 2D meshes. Such algorithms - and parameters - should be preferred in future clinical studies for identifying AF drivers and minimizing methodological heterogeneities. This would facilitate comparisons in rotor-guided ablation outcomes in future works. es_ES
dc.description.sponsorship This work was supported by the NIHR Leicester Biomedical Research Centre, UK. XL received research grants from Medical Research Council UK (MRC DPFS Ref: MR/S037306/1). TA received research grants from the British Heart Foundation (BHF Project Grant No. PG/18/33/33780), BHF Research Accelerator Award funding and Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP, Brazil, Grant No. 2017/00319-8). MG research was funded by a research grant from the Instituto de Salud Carlos III (Ministry of Economy and Competitiveness, Spain: PI13-00903). GN received funding from the British Heart Foundation (BHF Programme Grant, RG/17/3/32774). es_ES
dc.language Inglés es_ES
dc.publisher Frontiers Media SA es_ES
dc.relation.ispartof Frontiers in Physiology es_ES
dc.rights Reconocimiento (by) es_ES
dc.subject Atrial fibrillation es_ES
dc.subject Catheter ablation es_ES
dc.subject Non-contact mapping es_ES
dc.subject Atrial electrograms es_ES
dc.subject Phase singularity es_ES
dc.subject Rotor es_ES
dc.subject Spiral wave es_ES
dc.subject.classification TECNOLOGIA ELECTRONICA es_ES
dc.title Standardizing Single-Frame Phase Singularity Identification Algorithms and Parameters in Phase Mapping During Human Atrial Fibrillation es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.3389/fphys.2020.00869 es_ES
dc.relation.projectID info:eu-repo/grantAgreement/FAPESP//2017%2F00319-8/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/UKRI//MR%2FS037306%2F1/GB/Development of a successful novel technology for sudden cardiac death risk stratification for clinical use - LifeMap/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/BHF//PG%2F18%2F33%2F33780/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/BHF//RG%2F17%2F3%2F32774/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MINECO//PI13%2F00903/ES/Estudio preclínico de la implantación de parches de tejido cardiaco bioartificial electromecánicamente entrenados en un modelo de infarto de miocardio porcino. Desarrollo de bioreactores con estimulación electromecánica./ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Ingeniería Electrónica - Departament d'Enginyeria Electrònica es_ES
dc.description.bibliographicCitation Li, X.; Almeida, TP.; Dastagir, N.; Guillem Sánchez, MS.; Salinet, J.; Chu, GS.; Stafford, PJ.... (2020). Standardizing Single-Frame Phase Singularity Identification Algorithms and Parameters in Phase Mapping During Human Atrial Fibrillation. Frontiers in Physiology. 11:1-16. https://doi.org/10.3389/fphys.2020.00869 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.3389/fphys.2020.00869 es_ES
dc.description.upvformatpinicio 1 es_ES
dc.description.upvformatpfin 16 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 11 es_ES
dc.identifier.pmid 32792983 es_ES
dc.identifier.pmcid PMC7386053 es_ES
dc.relation.pasarela S\420203 es_ES
dc.contributor.funder British Heart Foundation es_ES
dc.contributor.funder UK Research and Innovation es_ES
dc.contributor.funder Medical Research Council, Reino Unido es_ES
dc.contributor.funder National Institute for Health Research, Reino Unido es_ES
dc.contributor.funder Fundação de Amparo à Pesquisa do Estado de São Paulo es_ES
dc.contributor.funder Ministerio de Economía y Competitividad es_ES
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