- -

Identification and genomic characterization of a novel tobamovirus from prickly pear cactus

RiuNet: Repositorio Institucional de la Universidad Politécnica de Valencia

Compartir/Enviar a

Citas

Estadísticas

  • Estadisticas de Uso

Identification and genomic characterization of a novel tobamovirus from prickly pear cactus

Mostrar el registro completo del ítem

Salgado-Ortiz, H.; De La Torre-Almaraz, R.; Sanchez Navarro, JA.; Pallás Benet, V. (2020). Identification and genomic characterization of a novel tobamovirus from prickly pear cactus. Archives of Virology. 165(3):781-784. https://doi.org/10.1007/s00705-020-04528-3

Por favor, use este identificador para citar o enlazar este ítem: http://hdl.handle.net/10251/166083

Ficheros en el ítem

Metadatos del ítem

Título: Identification and genomic characterization of a novel tobamovirus from prickly pear cactus
Autor: Salgado-Ortiz, Héctor De La Torre-Almaraz, Rodolfo SANCHEZ NAVARRO, JESUS ANGEL Pallás Benet, Vicente
Entidad UPV: Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes
Fecha difusión:
Resumen:
[EN] In this work, we describe the complete sequence and genome organization of a novel tobamovirus detected in a prickly pear plant (Opuntia sp.) by high-throughput sequencing, tentatively named "opuntia virus 2". The ...[+]
Derechos de uso: Reserva de todos los derechos
Fuente:
Archives of Virology. (issn: 0304-8608 )
DOI: 10.1007/s00705-020-04528-3
Editorial:
Springer-Verlag
Versión del editor: https://doi.org/10.1007/s00705-020-04528-3
Código del Proyecto:
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/BIO2017-88321-R/ES/DESCRIFRANDO INTERACCIONES VIRUS-PLANTA ESENCIALES PARA LA SUSCEPTIBILIDAD Y%2FO RESISTENCIA EN DOS PATOSISTEMAS AGRONOMICAMENTE RELEVANTES/
info:eu-repo/grantAgreement/UNAM//IN216317/
Agradecimientos:
This study was funded by project no. IN216317 of UNAM-Programa de Apoyo a Proyectos de Investigacion e Innovacion Tecnologica (PAPIIT) and by Grant BIO2017-88321-R from the Spanish Agencia Estatal de Investigacion (AEI) ...[+]
Tipo: Artículo

References

Sánchez LDL, López GC, Ávalos HI (2013) Nomenclatura vernácula, uso y manejo de Opuntia spp. en Santiago Bayacora, Durango, México. Revista Chapingo Serie Horticultura 19:367–380

Alonso BB, Mora AG, Valdovinos PG, Ochoa MDL, Rodríguez LE, De La Torre AR (2015) Asociación de un Potexvirus como agente causal de manchas cloróticas en Opuntia ficus-indica. Rev Mex Fitopatol 33:75–86

De La Torre AR, Salgado OH, Salazar SM, Pallás V, Sánchez NJA, Valverde RA (2016) First report of Schlumbergera virus X in prickly pear (Opuntia ficus-indica) in Mexico. Plant Dis 100(8):1799 [+]
Sánchez LDL, López GC, Ávalos HI (2013) Nomenclatura vernácula, uso y manejo de Opuntia spp. en Santiago Bayacora, Durango, México. Revista Chapingo Serie Horticultura 19:367–380

Alonso BB, Mora AG, Valdovinos PG, Ochoa MDL, Rodríguez LE, De La Torre AR (2015) Asociación de un Potexvirus como agente causal de manchas cloróticas en Opuntia ficus-indica. Rev Mex Fitopatol 33:75–86

De La Torre AR, Salgado OH, Salazar SM, Pallás V, Sánchez NJA, Valverde RA (2016) First report of Schlumbergera virus X in prickly pear (Opuntia ficus-indica) in Mexico. Plant Dis 100(8):1799

De La Torre AR, Salgado OH, Salazar SM, Pallás V, Sánchez NJA, Valverde RA (2016) First report of Rattail cactus necrosis-associated virus in prickly pear fruit (Opuntia albicarpa Scheinvar) in Mexico. Plant Dis 100(11):2339

Min BE, Chung BN, Kim MJ, Ha JH, Lee BY, Ryu KH (2006) Cactus mild mottle virus is a new cactus-infecting tobamovirus. Arch Virol 151(1):13–21

Kim NR, Hong JS, Song YS, Chung BN, Park JW, Ryu KH (2012) The complete genome sequence of a member of a new species of tobamovirus (rattail cactus necrosis-associated virus) isolated from Aporocactus flagelliformis. Arch Virol 157(1):185–187

Adams MJ, Antoniw JF, Kreuze J (2009) Virgaviridae: a new family of rod-shaped plant viruses. Arch Virol 154(12):1967–1972. https://doi.org/10.1007/s00705-009-0506-6

Lecoq H, Desbiez C (2012) Viruses of cucurbit crops in the Mediterranean region: an ever-changing picture. Adv Virus Res 84:67–126

Haas BJ, Papanicolaou A, Yassour M, Grabherr M, Blood PD, Bowden J, Regev A (2013) De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity. Nat Protoc 8(8):1–43

Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402

Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33(7):1870–1874

Song YS, Min BE, Hong JS, Rhie MJ, Kim MJ, Ryu KH (2006) Molecular evidence supporting the confirmation of Maracuja mosaic virus as a species of the genus Tobamovirus and production of an infectious cDNA transcript. Arch Virol 151:2337–2348

Gibbs AJ, Wood J, Garcia-Arenal F, Ohshima K, Armstrong JS (2015) Tobamoviruses have probably co-diverged with their eudicotyledonous hosts for at least 110 million years. Virus Evol 1(1):vev019

Adams MJ, Adkins S, Blagard C et al (2018) International Committee on Taxonomy of Viruses (ICTV) Report on the taxonomy of the Virgaviridae. http://www.ictv.global/report/virgaviridae. Accessed 19 Oct 2018

[-]

recommendations

 

Este ítem aparece en la(s) siguiente(s) colección(ones)

Mostrar el registro completo del ítem