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Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation

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Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation

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dc.contributor.author Ferreiros-Vidal, Isabel es_ES
dc.contributor.author Carroll, Thomas es_ES
dc.contributor.author Zhang, Tianyi es_ES
dc.contributor.author Lagani, Vincenzo es_ES
dc.contributor.author Ramirez, Ricardo N. es_ES
dc.contributor.author Ing-Simmons, Elizabeth es_ES
dc.contributor.author Gomez-Valades, Alicia G. es_ES
dc.contributor.author Cooper, Lee es_ES
dc.contributor.author Liang, Ziwei es_ES
dc.contributor.author Papoutsoglou, Georgios es_ES
dc.contributor.author Dharmalingam, Gopuraja es_ES
dc.contributor.author Guo, Ya es_ES
dc.contributor.author Tarazona, Sonia es_ES
dc.contributor.author Fernandes, Sunjay J. es_ES
dc.contributor.author Noori, Peri es_ES
dc.date.accessioned 2023-05-08T18:02:04Z
dc.date.available 2023-05-08T18:02:04Z
dc.date.issued 2019-04 es_ES
dc.identifier.issn 1544-9173 es_ES
dc.identifier.uri http://hdl.handle.net/10251/193212
dc.description.abstract [EN] The differentiation of self-renewing progenitor cells requires not only the regulation of lineage- and developmental stage-specific genes but also the coordinated adaptation of housekeeping functions from a metabolically active, proliferative state toward quiescence. How metabolic and cell-cycle states are coordinated with the regulation of cell type-specific genes is an important question, because dissociation between differentiation, cell cycle, and metabolic states is a hallmark of cancer. Here, we use a model system to systematically identify key transcriptional regulators of Ikaros-dependent B cell-progenitor differentiation. We find that the coordinated regulation of housekeeping functions and tissue-specific gene expression requires a feedforward circuit whereby Ikaros down-regulates the expression of Myc. Our findings show how coordination between differentiation and housekeeping states can be achieved by interconnected regulators. Similar principles likely coordinate differentiation and housekeeping functions during progenitor cell differentiation in other cell lineages. es_ES
dc.description.sponsorship EU FP7-Health STATegra project (grant number 36000). AG, VL, RR, AC, GP, ST, SF, PN, ME, JT, AM, MM, DGC. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Wellcome (grant number 099276/Z/12/Z). MM. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Medical Research Council, UK (grant number Institute Core Funding). AGF, BL, MM. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Bloodwise (grant number 09036). LC. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Wellcome (grant number). BL. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. European Research Council (grant number Repleniche). AGF. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. European Research Council (grant number 617393-CAUSALPATH). IT, VL, GP. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. MINECO (grant number BIO2015-71658-R). AC, ST. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. es_ES
dc.language Inglés es_ES
dc.publisher Public Library of Science es_ES
dc.relation.ispartof PLoS Biology es_ES
dc.rights Reconocimiento (by) es_ES
dc.subject.classification ESTADISTICA E INVESTIGACION OPERATIVA es_ES
dc.title Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1371/journal.pbio.2006506 es_ES
dc.relation.projectID info:eu-repo/grantAgreement/EC/FP7/306000/EU/User-driven Development of Statistical Methods for Experimental Planning, Data Gathering, and Integrative Analysis of Next Generation Sequencing, Proteomics and Metabolomics data/STATEGRA es_ES
dc.relation.projectID info:eu-repo/grantAgreement/WT//099276%2FZ%2F12%2FZ%2FWT/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/EC/FP7/617393/EU/Next Generation Causal Analysis: Inspired by the Induction of Biological Pathways from Cytometry Data/CAUSALPATH es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MINECO//BIO2015-71658-R/ES/NUEVOS METODOS PARA LOS RETOS EMERGENTES EN EL ANALISIS DE DATOS DE SECUENCIACION MASIVA/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Escola Tècnica Superior d'Enginyeria Informàtica es_ES
dc.description.bibliographicCitation Ferreiros-Vidal, I.; Carroll, T.; Zhang, T.; Lagani, V.; Ramirez, RN.; Ing-Simmons, E.; Gomez-Valades, AG.... (2019). Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation. PLoS Biology. 17(4):1-28. https://doi.org/10.1371/journal.pbio.2006506 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1371/journal.pbio.2006506 es_ES
dc.description.upvformatpinicio 1 es_ES
dc.description.upvformatpfin 28 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 17 es_ES
dc.description.issue 4 es_ES
dc.identifier.pmid 30978178 es_ES
dc.identifier.pmcid PMC6481923 es_ES
dc.relation.pasarela S\390335 es_ES
dc.contributor.funder Wellcome Trust es_ES
dc.contributor.funder European Commission es_ES
dc.contributor.funder Medical Research Council, Reino Unido es_ES
dc.contributor.funder Ministerio de Economía y Competitividad es_ES


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