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A quantitative method to measure geranylgeranyl diphosphate (GGPP) and geranylgeranyl monophosphate (GGP) in tomato (Solanum lycopersicum) fruit

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A quantitative method to measure geranylgeranyl diphosphate (GGPP) and geranylgeranyl monophosphate (GGP) in tomato (Solanum lycopersicum) fruit

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dc.contributor.author Zita, Wayne es_ES
dc.contributor.author Shanmugabalaji, Venkatasalam es_ES
dc.contributor.author Ezquerro-Urzanqui, Miguel es_ES
dc.contributor.author RODRIGUEZ-CONCEPCION, Manuel es_ES
dc.contributor.author Kessler, Felix es_ES
dc.contributor.author Glauser, Gaetan es_ES
dc.date.accessioned 2024-11-28T19:05:22Z
dc.date.available 2024-11-28T19:05:22Z
dc.date.issued 2023-06-07 es_ES
dc.identifier.issn 1746-4811 es_ES
dc.identifier.uri http://hdl.handle.net/10251/212439
dc.description.abstract [EN] BackgroundIsoprenoids are a very large class of metabolites playing a key role in plant physiological processes such as growth, stress resistance, fruit flavor, and color. In chloroplasts and chromoplasts, the diterpene compound geranylgeranyl diphosphate (GGPP) is the metabolic precursor required for the biosynthesis of tocopherols, plastoquinones, phylloquinone, chlorophylls, and carotenoids. Despite its key role for the plant metabolism, reports on GGPP physiological concentrations in planta have been extremely scarce.ResultsIn this study, we developed a method to quantify GGPP and its hydrolysis product geranylgeranyl monophosphate (GGP) from tomato fruit, using ultra-high performance liquid chromatography coupled with tandem mass spectrometry (UHPLC-MS/MS). Quantification was done by external calibration and the method was validated in terms of specificity, precision, accuracy, and detection and quantitation limits. We further demonstrate the validity of our approach by analysing GGPP contents in the ripe fruits of wild-type tomatoes and mutants defective in GGPP production. Finally, we also show that the sample preparation is key to prevent GGPP hydrolysis and mitigate its conversion to GGP.ConclusionOur study provides an efficient tool to investigate the metabolic fluxes required for GGPP supply and consumption in tomato fruit. es_ES
dc.description.sponsorship This work was funded by the Swiss National Science Foundation (Project 310030_208000 to F.K.) and by the University of Neuchâtel. es_ES
dc.language Inglés es_ES
dc.publisher Springer (Biomed Central Ltd.) es_ES
dc.relation.ispartof Plant Methods es_ES
dc.rights Reconocimiento (by) es_ES
dc.subject Geranylgeranyl diphosphate es_ES
dc.subject GGPP es_ES
dc.subject Geranylgeranyl monophosphate es_ES
dc.subject GGP es_ES
dc.subject Geranylgeranyl diphosphate synthase es_ES
dc.subject GGPPS es_ES
dc.subject UHPLC-MS/MS es_ES
dc.subject Isoprenoid es_ES
dc.subject Carotenoid es_ES
dc.title A quantitative method to measure geranylgeranyl diphosphate (GGPP) and geranylgeranyl monophosphate (GGP) in tomato (Solanum lycopersicum) fruit es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1186/s13007-023-01034-w es_ES
dc.relation.projectID info:eu-repo/grantAgreement/SNSF//310030_208000/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes es_ES
dc.description.bibliographicCitation Zita, W.; Shanmugabalaji, V.; Ezquerro-Urzanqui, M.; Rodriguez-Concepcion, M.; Kessler, F.; Glauser, G. (2023). A quantitative method to measure geranylgeranyl diphosphate (GGPP) and geranylgeranyl monophosphate (GGP) in tomato (Solanum lycopersicum) fruit. Plant Methods. 19(1). https://doi.org/10.1186/s13007-023-01034-w es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1186/s13007-023-01034-w es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 19 es_ES
dc.description.issue 1 es_ES
dc.identifier.pmid 37287006 es_ES
dc.identifier.pmcid PMC10249317 es_ES
dc.relation.pasarela S\514162 es_ES
dc.contributor.funder Université de Neuchâtel es_ES
dc.contributor.funder Swiss National Science Foundation es_ES


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