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Complete sequence of three different biotypes of Tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain

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Complete sequence of three different biotypes of Tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain

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dc.contributor.author Debreczeni, Diana Elvira es_ES
dc.contributor.author López Del Rincón, Carmelo es_ES
dc.contributor.author Aramburu, José es_ES
dc.contributor.author Daros Arnau, Jose Antonio es_ES
dc.contributor.author Soler Aleixandre, Salvador es_ES
dc.contributor.author Galipienso Torregrosa, Luis es_ES
dc.contributor.author Falk, Bryce W. es_ES
dc.contributor.author Rubio Miguelez, Luis es_ES
dc.date.accessioned 2016-05-02T09:34:05Z
dc.date.available 2016-05-02T09:34:05Z
dc.date.issued 2015-08
dc.identifier.issn 0304-8608
dc.identifier.uri http://hdl.handle.net/10251/63315
dc.description.abstract [EN] Tomato spotted wilt virus (TSWV) is worldwide spread and causes production losses in many important horticultural crops such as tomato and pepper. Breeding resistant cultivars has been the most successful method for disease control. So far, only two resistance genes have been found to confer resistance against a wide spectrum of TSWV isolates: Sw-5 in tomato and Tsw in pepper. However, TSWV resistance-breaking isolates have emerged in different countries after a few years of implementation of resistant cultivars. In this paper we report the first complete nucleotide sequence of three TSWV isolates from Spain with different biotypes according to the ability of overcoming resistance: LL-N.05 (wild type, WT), Pujol1TL3 (Sw-5 resistance breaking, SBR) and PVR (Tsw resistance-breaking, TBR). The genome of these TSWV isolates consisted of three genomic segments: L (8913-8914 nt), M (4752-4825 nt) and S (2924-2961 nt). Variations in nucleotide sequences and genomic lengths among the different virus biotypes are reported here. Phylogenetic analysis of the five TSWV open reading frames showed evidences of reassortment between genomic segments of LL-N.05 and Pujol1TL3, which was supported by analysis with different recombination-detecting algorithms. Genetic distances were uncorrelated to biotype, host or geographic location. es_ES
dc.description.sponsorship D.E.D. was the recipient of a predoctoral FPU fellowship from the Spanish Ministry of Education, Culture and Sports. This work was funded in part by grants RTA2008-00010-C03 and RTA2013-00047-C02 from Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA) and grants ACOMP/2009/103, ACOMP/2010/085 and ACOMP/2011/078 from Generalitat Valenciana. Work in the J.A.D. laboratory was supported by grant BIO2011-26741 from the Spanish Ministerio de Economia y Competitividad. We thank Veronica Aragones (IBMCP, CSIC-UPV) for technical assistance. en_EN
dc.language Inglés es_ES
dc.publisher Springer Verlag (Germany) es_ES
dc.relation.ispartof Archives of Virology es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject GENOME REASSORTMENT es_ES
dc.subject PLANT-VIRUSES es_ES
dc.subject GENE es_ES
dc.subject PROTEIN es_ES
dc.subject Variability es_ES
dc.subject AVIRULENCE es_ES
dc.subject Segment es_ES
dc.subject.classification GENETICA es_ES
dc.subject.classification MICROBIOLOGIA es_ES
dc.title Complete sequence of three different biotypes of Tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1007/s00705-015-2453-8
dc.relation.projectID info:eu-repo/grantAgreement/MINECO//RTA2013-00047-C02/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//RTA2008-00010-C03-01/ES/Diversidad genética y factores evolutivos y epidemiológicos implicados en los aislados españoles de TSWV que superan las resistencias genéticas Sw-5 de tomate y Tsw de pimiento/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//RTA2008-00010-C03-03/ES/Estudio de los determinantes genéticos de TSWV implicados en la superación de las resistencias de tomate y pimiento. Desarrollo de nuevas variedades resistentes/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/Generalitat Valenciana//ACOMP%2F2009%2F103/ES/Diversidad genética y factores evolutivos y epidemiológicos implicados en los aislados españoles de TSWV que superan las resistencias genéticas Sw-5 de tomate y Tsw de pimiento/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//ACOMP%2F2010%2F085/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//ACOMP%2F2011%2F078/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//BIO2011-26741/ES/PATOGENOS DE RNA DE PLANTAS: INTERACCION CON EL HUESPED Y DESARROLLO DE HERRAMIENTAS BIOTECNOLOGICAS/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Biotecnología - Departament de Biotecnologia es_ES
dc.description.bibliographicCitation Debreczeni, DE.; López Del Rincón, C.; Aramburu, J.; Daros Arnau, JA.; Soler Aleixandre, S.; Galipienso Torregrosa, L.; Falk, BW.... (2015). Complete sequence of three different biotypes of Tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain. Archives of Virology. 160:2117-2123. https://doi.org/10.1007/s00705-015-2453-8 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://dx.doi.org/10.1007/s00705-015-2453-8 es_ES
dc.description.upvformatpinicio 2117 es_ES
dc.description.upvformatpfin 2123 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 160 es_ES
dc.relation.senia 294935 es_ES
dc.identifier.eissn 1432-8798
dc.contributor.funder Generalitat Valenciana es_ES
dc.contributor.funder Ministerio de Ciencia e Innovación es_ES
dc.contributor.funder Ministerio de Economía y Competitividad es_ES
dc.contributor.funder Ministerio de Educación, Cultura y Deporte es_ES
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