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The genome of melon (Cucumis melo L.)

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The genome of melon (Cucumis melo L.)

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dc.contributor.author Garcia-Mas, J. es_ES
dc.contributor.author Benjak, A. es_ES
dc.contributor.author Sanseverino, W. es_ES
dc.contributor.author Bourgeois, M. es_ES
dc.contributor.author Mir, G. es_ES
dc.contributor.author Gonzalez, V. M. es_ES
dc.contributor.author Henaff, E. es_ES
dc.contributor.author Câmara, F. es_ES
dc.contributor.author Cozzuto, L. es_ES
dc.contributor.author Lowy, E. es_ES
dc.contributor.author Alioto, T. es_ES
dc.contributor.author Capella-Gutierrez, S. es_ES
dc.contributor.author Blanca Postigo, José Miguel es_ES
dc.contributor.author Cañizares Sales, Joaquín es_ES
dc.contributor.author Ziarsolo Areitioaurtena, Pello es_ES
dc.contributor.author Nuez Viñals, Fernando es_ES
dc.contributor.author Picó Sirvent, María Belén es_ES
dc.date.accessioned 2016-06-02T09:47:12Z
dc.date.available 2016-06-02T09:47:12Z
dc.date.issued 2012-07-17
dc.identifier.issn 0027-8424
dc.identifier.uri http://hdl.handle.net/10251/65095
dc.description.abstract We report the genome sequence of melon, an important horticultural crop worldwide. We assembled 375 Mb of the double-haploid line DHL92, representing 83.3%of the estimatedmelon genome.We predicted 27,427 protein-coding genes, which we analyzed by reconstructing 22,218 phylogenetic trees, allowing mapping of the orthology and paralogy relationships of sequenced plant genomes. We observed the absence of recent whole-genome duplications in the melon lineage since the ancient eudicot triplication, and our data suggest that transposon amplification may in part explain the increased size of the melon genome compared with the close relative cucumber. A low number of nucleotide-binding site leucinerich repeat disease resistance genes were annotated, suggesting the existence of specific defense mechanisms in this species. The DHL92 genome was compared with that of its parental lines allowing the quantification of sequence variability in the species. The use of the genome sequence in future investigations will facilitate the understanding of evolution of cucurbits and the improvement of breeding strategies. es_ES
dc.description.sponsorship We thank Marc Oliver (Syngenta) for the recombinant inbred line genetic map. The cucumber Gy14 genome was produced by the Joint Genome Institute (http://www.jgi.doe.gov/). We acknowledge funding from Fundacion Genoma Espana; Semillas Fito; Syngenta Seeds; the governments of Catalunya, Andalucia, Madrid, Castilla-La Mancha, and Murcia; Savia Biotech; Roche Diagnostics; and Sistemas Genomicos. P. P. and J.G.-M. were funded by the Spanish Ministry of Science and Innovation (CSD2007-00036) and the Xarxa de Referencia d'R+D+I en Biotecnologia (Generalitat de Catalunya). R. G. and A.N. acknowledge the Spanish National Bioinformatics Institute for funding. T.M.-B. is supported by European Research Council Starting Grant StG_20091118. en_EN
dc.language Inglés es_ES
dc.publisher National Academy of Sciences es_ES
dc.relation.ispartof Proceedings of the National Academy of Sciences es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject De novo genome sequence es_ES
dc.subject Phylome es_ES
dc.subject.classification GENETICA es_ES
dc.title The genome of melon (Cucumis melo L.) es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1073/pnas.1205415109
dc.relation.projectID info:eu-repo/grantAgreement/MEC//CSD2007-00036/ES/Centro de Genómica Básica y de orientación Agroalimentaria/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/ERC/ERC-2009-STG/20091118/EU/ es_ES
dc.rights.accessRights Cerrado es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Biotecnología - Departament de Biotecnologia es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario de Conservación y Mejora de la Agrodiversidad Valenciana - Institut Universitari de Conservació i Millora de l'Agrodiversitat Valenciana es_ES
dc.description.bibliographicCitation Garcia-Mas, J.; Benjak, A.; Sanseverino, W.; Bourgeois, M.; Mir, G.; Gonzalez, VM.; Henaff, E.... (2012). The genome of melon (Cucumis melo L.). Proceedings of the National Academy of Sciences. 109(29):11872-11877. https://doi.org/10.1073/pnas.1205415109 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion http://dx.doi.org/10.1073/pnas.1205415109 es_ES
dc.description.upvformatpinicio 11872 es_ES
dc.description.upvformatpfin 11877 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 109 es_ES
dc.description.issue 29 es_ES
dc.relation.senia 230383 es_ES
dc.contributor.funder Ministerio de Educación y Ciencia es_ES
dc.contributor.funder Fundación Genoma España es_ES
dc.contributor.funder Generalitat de Catalunya es_ES
dc.contributor.funder Roche Diagnostics es_ES
dc.contributor.funder Semillas Fitó es_ES
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