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Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems

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Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems

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dc.contributor.author Herranz Gordo, Maria Del Carmen es_ES
dc.contributor.author Navarro Bohigues, José Antonio es_ES
dc.contributor.author Sommen, Evelien es_ES
dc.contributor.author Pallás Benet, Vicente es_ES
dc.date.accessioned 2016-06-10T07:53:39Z
dc.date.available 2016-06-10T07:53:39Z
dc.date.issued 2015-02-22
dc.identifier.issn 1471-2164
dc.identifier.uri http://hdl.handle.net/10251/65624
dc.description.abstract Conclusions: We compare for the first time the sRNA profile of four different tissues, including source, sink and conductive (phloem) tissues, in two plant-virus pathosystems. Our results indicate that antiviral silencing machinery in melon and cucumber acts mainly through DCL4. Upon infection, the total sRNA pattern in phloem remains unchanged in contrast to the rest of the analyzed tissues indicating a certain tissue-tropism to this polulation. Independently of the accumulation level of the vsRNAs both viruses were able to modulate the host sRNA pattern. es_ES
dc.description.sponsorship We thank Dr A. Niehl for critical reading and helpful comments on the manuscript. This work was funded by a supporting program for the research from the Universidad Politecnica de Valencia (PAID-05-10), a grant BIO2011-25018 from the Spanish granting agency Direccion General de Investigacion Cientifica and the PROMETEO program 2011/003 from the Generalitat Valenciana. MCH is the recipient of a contract from JAE-DOC program of the CSIC, JAN is the recipient of a postdoctoral contract from the Ministerio de Educacion y Ciencia of Spain. en_EN
dc.language Inglés es_ES
dc.publisher BioMed Central es_ES
dc.relation.ispartof BMC Genomics es_ES
dc.rights Reconocimiento (by) es_ES
dc.subject Melon,Cucumber,Virus,Deep-sequencing,Small RNAs,Phloem es_ES
dc.subject Melon es_ES
dc.subject Cucumber es_ES
dc.subject Virus es_ES
dc.subject Deep-sequencing es_ES
dc.subject Small RNAs es_ES
dc.subject Phloem es_ES
dc.title Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1186/s12864-015-1327-5
dc.relation.projectID info:eu-repo/grantAgreement/UPV//PAID-05-10/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//BIO2011-25018/ES/TRAFICO INTRACELULAR, INTERCELULAR Y VASCULAR DE RNAS Y PROTEINAS VIRALES Y SUBVIRALES EN PLANTAS¿/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//PROMETEO%2F2011%2F003/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes es_ES
dc.description.bibliographicCitation Herranz Gordo, MDC.; Navarro Bohigues, JA.; Sommen, E.; Pallás Benet, V. (2015). Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems. BMC Genomics. 16:1-15. https://doi.org/10.1186/s12864-015-1327-5 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion http://dx.doi.org/10.1186/s12864-015-1327-5 es_ES
dc.description.upvformatpinicio 1 es_ES
dc.description.upvformatpfin 15 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 16 es_ES
dc.relation.senia 309783 es_ES
dc.identifier.pmid 25765188 en_EN
dc.identifier.pmcid PMC4345012 en_EN
dc.contributor.funder Ministerio de Ciencia e Innovación es_ES
dc.contributor.funder Generalitat Valenciana es_ES
dc.contributor.funder Universitat Politècnica de València es_ES
dc.contributor.funder Ministerio de Educación y Ciencia es_ES
dc.contributor.funder Consejo Superior de Investigaciones Científicas es_ES
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