- -

Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses

RiuNet: Institutional repository of the Polithecnic University of Valencia

Share/Send to

Cited by


  • Estadisticas de Uso

Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses

Show full item record

Corrales, A.; González Nebauer, S.; Carrillo, L.; Fernández Nohales, P.; Marques Signes, J.; Renau Morata, B.; Granell, A.... (2014). Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses. Journal of Experimental Botany. 65(4):995-1012. https://doi.org/10.1093/jxb/ert451

Por favor, use este identificador para citar o enlazar este ítem: http://hdl.handle.net/10251/73307

Files in this item

Item Metadata

Title: Characterization of tomato Cycling Dof Factors reveals conserved and new functions in the control of flowering time and abiotic stress responses
Author: Corrales, Alba-Rocio González Nebauer, Sergio Carrillo, Laura Fernández Nohales, Pedro Marques Signes, Jorge Renau Morata, Begoña Granell, Antonio Pollmann, Stephan Vicente-Carbajosa, Jesus Molina Romero, Rosa Victoria Medina, Joaquin
UPV Unit: Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes
Universitat Politècnica de València. Departamento de Producción Vegetal - Departament de Producció Vegetal
Universitat Politècnica de València. Escuela Técnica Superior de Ingeniería Agronómica y del Medio Natural - Escola Tècnica Superior d'Enginyeria Agronòmica i del Medi Natural
Issued date:
[EN] DNA binding with One Finger (DOF) transcription factors are involved in multiple aspects of plant growth and development but their precise roles in abiotic stress tolerance are largely unknown. Here we report a group ...[+]
Subjects: CDF , DOF , Drought stress , Gene expression , Flowering time , Salt stress , Tomato
Copyrigths: Reserva de todos los derechos
Journal of Experimental Botany. (issn: 0022-0957 ) (eissn: 1460-2431 )
DOI: 10.1093/jxb/ert451
Oxford University Press (OUP)
Publisher version: https://dx.doi.org/10.1093/jxb/ert451
Project ID:
info:eu-repo/grantAgreement/EC/FP7/264474/EU/Metabolic Reprogramming by Induction of Transcription/
This work was supported by grants from Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA; project numbers: 2009-0004-C01, 2012-0008-C01), the Spanish Ministry of Science and Innovation (project ...[+]
Type: Artículo


AbuQamar, S., Luo, H., Laluk, K., Mickelbart, M. V., & Mengiste, T. (2009). Crosstalk between biotic and abiotic stress responses in tomato is mediated by theAIM1transcription factor. The Plant Journal, 58(2), 347-360. doi:10.1111/j.1365-313x.2008.03783.x

Alonso, R., Oñate-Sánchez, L., Weltmeier, F., Ehlert, A., Diaz, I., Dietrich, K., … Dröge-Laser, W. (2009). A Pivotal Role of the Basic Leucine Zipper Transcription Factor bZIP53 in the Regulation of Arabidopsis Seed Maturation Gene Expression Based on Heterodimerization and Protein Complex Formation. The Plant Cell, 21(6), 1747-1761. doi:10.1105/tpc.108.062968

Altschul, S. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research, 25(17), 3389-3402. doi:10.1093/nar/25.17.3389 [+]
AbuQamar, S., Luo, H., Laluk, K., Mickelbart, M. V., & Mengiste, T. (2009). Crosstalk between biotic and abiotic stress responses in tomato is mediated by theAIM1transcription factor. The Plant Journal, 58(2), 347-360. doi:10.1111/j.1365-313x.2008.03783.x

Alonso, R., Oñate-Sánchez, L., Weltmeier, F., Ehlert, A., Diaz, I., Dietrich, K., … Dröge-Laser, W. (2009). A Pivotal Role of the Basic Leucine Zipper Transcription Factor bZIP53 in the Regulation of Arabidopsis Seed Maturation Gene Expression Based on Heterodimerization and Protein Complex Formation. The Plant Cell, 21(6), 1747-1761. doi:10.1105/tpc.108.062968

Altschul, S. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research, 25(17), 3389-3402. doi:10.1093/nar/25.17.3389

An, H. (2004). CONSTANS acts in the phloem to regulate a systemic signal that induces photoperiodic flowering of Arabidopsis. Development, 131(15), 3615-3626. doi:10.1242/dev.01231

Artimo, P., Jonnalagedda, M., Arnold, K., Baratin, D., Csardi, G., de Castro, E., … Stockinger, H. (2012). ExPASy: SIB bioinformatics resource portal. Nucleic Acids Research, 40(W1), W597-W603. doi:10.1093/nar/gks400

Atherton, J. G., & Harris, G. P. (1986). Flowering. The Tomato Crop, 167-200. doi:10.1007/978-94-009-3137-4_4

Bailey, T. L., Boden, M., Buske, F. A., Frith, M., Grant, C. E., Clementi, L., … Noble, W. S. (2009). MEME SUITE: tools for motif discovery and searching. Nucleic Acids Research, 37(Web Server), W202-W208. doi:10.1093/nar/gkp335

Ben-Naim, O., Eshed, R., Parnis, A., Teper-Bamnolker, P., Shalit, A., Coupland, G., … Lifschitz, E. (2006). The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. The Plant Journal, 46(3), 462-476. doi:10.1111/j.1365-313x.2006.02706.x

BEUVE, N., RISPAIL, N., LAINE, P., CLIQUET, J.-B., OURRY, A., & LE DEUNFF, E. (2004). Putative role of gamma -aminobutyric acid (GABA) as a long-distance signal in up-regulation of nitrate uptake in Brassica napus L. Plant, Cell and Environment, 27(8), 1035-1046. doi:10.1111/j.1365-3040.2004.01208.x

Blumwald, E. (2000). Sodium transport and salt tolerance in plants. Current Opinion in Cell Biology, 12(4), 431-434. doi:10.1016/s0955-0674(00)00112-5

Bombarely, A., Menda, N., Tecle, I. Y., Buels, R. M., Strickler, S., Fischer-York, T., … Mueller, L. A. (2010). The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl. Nucleic Acids Research, 39(Database), D1149-D1155. doi:10.1093/nar/gkq866

Bressan, R., Bohnert, H., & Zhu, J.-K. (2009). Abiotic Stress Tolerance: From Gene Discovery in Model Organisms to Crop Improvement. Molecular Plant, 2(1), 1-2. doi:10.1093/mp/ssn097

Calvert, A. (1959). Effect of the Early Environment on the Development of Flowering in Tomato II. Light and Temperature Interactions. Journal of Horticultural Science, 34(3), 154-162. doi:10.1080/00221589.1959.11513954

Carmel-Goren, L., Liu, Y. S., Lifschitz, E., & Zamir, D. (2003). TheSELF-PRUNINGgene family in tomato. Plant Molecular Biology, 52(6), 1215-1222. doi:10.1023/b:plan.0000004333.96451.11

Chaves, M. M., Flexas, J., & Pinheiro, C. (2008). Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell. Annals of Botany, 103(4), 551-560. doi:10.1093/aob/mcn125

Claussen, W. (2005). Proline as a measure of stress in tomato plants. Plant Science, 168(1), 241-248. doi:10.1016/j.plantsci.2004.07.039

Clough, S. J., & Bent, A. F. (1998). Floral dip: a simplified method forAgrobacterium-mediated transformation ofArabidopsis thaliana. The Plant Journal, 16(6), 735-743. doi:10.1046/j.1365-313x.1998.00343.x

Cuartero, J., & Fernández-Muñoz, R. (1998). Tomato and salinity. Scientia Horticulturae, 78(1-4), 83-125. doi:10.1016/s0304-4238(98)00191-5

Czechowski, T., Stitt, M., Altmann, T., Udvardi, M. K., & Scheible, W.-R. (2005). Genome-Wide Identification and Testing of Superior Reference Genes for Transcript Normalization in Arabidopsis. Plant Physiology, 139(1), 5-17. doi:10.1104/pp.105.063743

Diaz, I., Vicente-Carbajosa, J., Abraham, Z., Martinez, M., Isabel-La Moneda, I., & Carbonero, P. (2002). The GAMYB protein from barley interacts with the DOF transcription factor BPBF and activates endosperm-specific genes during seed development. The Plant Journal, 29(4), 453-464. doi:10.1046/j.0960-7412.2001.01230.x

Dieleman, J. A., & Heuvelink, E. (1992). Factors affecting the number of leaves preceding the first inflorescence in the tomato. Journal of Horticultural Science, 67(1), 1-10. doi:10.1080/00221589.1992.11516214

Farrant, J. M., & Moore, J. P. (2011). Programming desiccation-tolerance: from plants to seeds to resurrection plants. Current Opinion in Plant Biology, 14(3), 340-345. doi:10.1016/j.pbi.2011.03.018

Fiehn, O., Kopka, J., Trethewey, R. N., & Willmitzer, L. (2000). Identification of Uncommon Plant Metabolites Based on Calculation of Elemental Compositions Using Gas Chromatography and Quadrupole Mass Spectrometry. Analytical Chemistry, 72(15), 3573-3580. doi:10.1021/ac991142i

Fornara, F., Panigrahi, K. C. S., Gissot, L., Sauerbrunn, N., Rühl, M., Jarillo, J. A., & Coupland, G. (2009). Arabidopsis DOF Transcription Factors Act Redundantly to Reduce CONSTANS Expression and Are Essential for a Photoperiodic Flowering Response. Developmental Cell, 17(1), 75-86. doi:10.1016/j.devcel.2009.06.015

Gaquerel, E., Heiling, S., Schoettner, M., Zurek, G., & Baldwin, I. T. (2010). Development and Validation of a Liquid Chromatography−Electrospray Ionization−Time-of-Flight Mass Spectrometry Method for Induced Changes inNicotiana attenuataLeaves during Simulated Herbivory. Journal of Agricultural and Food Chemistry, 58(17), 9418-9427. doi:10.1021/jf1017737

Gardiner, J., Sherr, I., & Scarpella, E. (2010). Expression of DOF genes identifies early stages of vascular development in Arabidopsis leaves. The International Journal of Developmental Biology, 54(8-9), 1389-1396. doi:10.1387/ijdb.093006jg

Gong, P., Zhang, J., Li, H., Yang, C., Zhang, C., Zhang, X., … Ye, Z. (2010). Transcriptional profiles of drought-responsive genes in modulating transcription signal transduction, and biochemical pathways in tomato. Journal of Experimental Botany, 61(13), 3563-3575. doi:10.1093/jxb/erq167

Goodstein, D. M., Shu, S., Howson, R., Neupane, R., Hayes, R. D., Fazo, J., … Rokhsar, D. S. (2011). Phytozome: a comparative platform for green plant genomics. Nucleic Acids Research, 40(D1), D1178-D1186. doi:10.1093/nar/gkr944

Gualberti, G., Papi, M., Bellucci, L., Ricci, I., Bouchez, D., Camilleri, C., … Vittorioso, P. (2002). Mutations in the Dof Zinc Finger Genes DAG2 and DAG1 Influence with Opposite Effects the Germination of Arabidopsis Seeds. The Plant Cell, 14(6), 1253-1263. doi:10.1105/tpc.010491

Guindon, S., & Gascuel, O. (2003). A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood. Systematic Biology, 52(5), 696-704. doi:10.1080/10635150390235520

Gullberg, J., Jonsson, P., Nordström, A., Sjöström, M., & Moritz, T. (2004). Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry. Analytical Biochemistry, 331(2), 283-295. doi:10.1016/j.ab.2004.04.037

Guo, Y., Qin, G., Gu, H., & Qu, L.-J. (2009). Dof5.6/HCA2, a Dof Transcription Factor Gene, Regulates Interfascicular Cambium Formation and Vascular Tissue Development in Arabidopsis. The Plant Cell, 21(11), 3518-3534. doi:10.1105/tpc.108.064139

Haupt-Herting, S., Klug, K., & Fock, H. P. (2001). A New Approach to Measure Gross CO2 Fluxes in Leaves. Gross CO2 Assimilation, Photorespiration, and Mitochondrial Respiration in the Light in Tomato under Drought Stress. Plant Physiology, 126(1), 388-396. doi:10.1104/pp.126.1.388

Hernando-Amado, S., González-Calle, V., Carbonero, P., & Barrero-Sicilia, C. (2012). The family of DOF transcription factors in Brachypodium distachyon: phylogenetic comparison with rice and barley DOFs and expression profiling. BMC Plant Biology, 12(1), 202. doi:10.1186/1471-2229-12-202

Hoekstra, F. A., Golovina, E. A., & Buitink, J. (2001). Mechanisms of plant desiccation tolerance. Trends in Plant Science, 6(9), 431-438. doi:10.1016/s1360-1385(01)02052-0

Hoffman, N. E., Ko, K., Milkowski, D., & Pichersky, E. (1991). Isolation and characterization of tomato cDNA and genomic clones encoding the ubiquitin gene ubi3. Plant Molecular Biology, 17(6), 1189-1201. doi:10.1007/bf00028735

Huang, Z., Zhang, Z., Zhang, X., Zhang, H., Huang, D., & Huang, R. (2004). Tomato TERF1 modulates ethylene response and enhances osmotic stress tolerance by activating expression of downstream genes. FEBS Letters, 573(1-3), 110-116. doi:10.1016/j.febslet.2004.07.064

HUSSEY, G. (1963). Growth and Development in the Young Tomato: I. THE EFFECT OF TEMPERATURE AND LIGHT INTENSITY ON GROWTH OF THE SHOOT APEX AND LEAF PRIMORDIA. Journal of Experimental Botany, 14(2), 316-325. doi:10.1093/jxb/14.2.316

Imaizumi, T. (2005). FKF1 F-Box Protein Mediates Cyclic Degradation of a Repressor of CONSTANS in Arabidopsis. Science, 309(5732), 293-297. doi:10.1126/science.1110586

IWAMOTO, M., HIGO, K., & TAKANO, M. (2009). Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice. Plant, Cell & Environment, 32(5), 592-603. doi:10.1111/j.1365-3040.2009.01954.x

Jang, S., Marchal, V., Panigrahi, K. C. S., Wenkel, S., Soppe, W., Deng, X.-W., … Coupland, G. (2008). Arabidopsis COP1 shapes the temporal pattern of CO accumulation conferring a photoperiodic flowering response. The EMBO Journal, 27(8), 1277-1288. doi:10.1038/emboj.2008.68

Jones, M. L. (2013). Mineral nutrient remobilization during corolla senescence in ethylene-sensitive and -insensitive flowers. AoB Plants, 5(0), plt023-plt023. doi:10.1093/aobpla/plt023

Karimi, M., Depicker, A., & Hilson, P. (2007). Recombinational Cloning with Plant Gateway Vectors. Plant Physiology, 145(4), 1144-1154. doi:10.1104/pp.107.106989

Kerepesi, I., & Galiba, G. (2000). Osmotic and Salt Stress-Induced Alteration in Soluble Carbohydrate Content in Wheat Seedlings. Crop Science, 40(2), 482. doi:10.2135/cropsci2000.402482x

Kinet, J. M. (1977). Effect of light conditions on the development of the inflorescence in tomato. Scientia Horticulturae, 6(1), 15-26. doi:10.1016/0304-4238(77)90074-7

Kirby, J., & Kavanagh, T. A. (2002). NAN fusions: a synthetic sialidase reporter gene as a sensitive and versatile partner for GUS. The Plant Journal, 32(3), 391-400. doi:10.1046/j.1365-313x.2002.01422.x

Kloosterman, B., Abelenda, J. A., Gomez, M. del M. C., Oortwijn, M., de Boer, J. M., Kowitwanich, K., … Bachem, C. W. B. (2013). Naturally occurring allele diversity allows potato cultivation in northern latitudes. Nature, 495(7440), 246-250. doi:10.1038/nature11912

Konishi, M., & Yanagisawa, S. (2007). Sequential activation of two Dof transcription factor gene promoters during vascular development in Arabidopsis thaliana. Plant Physiology and Biochemistry, 45(8), 623-629. doi:10.1016/j.plaphy.2007.05.001

Krohn, N. M., Yanagisawa, S., & Grasser, K. D. (2002). Specificity of the Stimulatory Interaction between Chromosomal HMGB Proteins and the Transcription Factor Dof2 and Its Negative Regulation by Protein Kinase CK2-mediated Phosphorylation. Journal of Biological Chemistry, 277(36), 32438-32444. doi:10.1074/jbc.m203814200

Kurai, T., Wakayama, M., Abiko, T., Yanagisawa, S., Aoki, N., & Ohsugi, R. (2011). Introduction of the ZmDof1 gene into rice enhances carbon and nitrogen assimilation under low-nitrogen conditions. Plant Biotechnology Journal, 9(8), 826-837. doi:10.1111/j.1467-7652.2011.00592.x

Kushwaha, H., Gupta, S., Singh, V. K., Rastogi, S., & Yadav, D. (2010). Genome wide identification of Dof transcription factor gene family in sorghum and its comparative phylogenetic analysis with rice and Arabidopsis. Molecular Biology Reports, 38(8), 5037-5053. doi:10.1007/s11033-010-0650-9

Lakhssassi, N., Doblas, V. G., Rosado, A., del Valle, A. E., Posé, D., Jimenez, A. J., … Botella, M. A. (2012). The Arabidopsis TETRATRICOPEPTIDE THIOREDOXIN-LIKE Gene Family Is Required for Osmotic Stress Tolerance and Male Sporogenesis. Plant Physiology, 158(3), 1252-1266. doi:10.1104/pp.111.188920

Lee, H. E., Shin, D., Park, S. R., Han, S.-E., Jeong, M.-J., Kwon, T.-R., … Byun, M.-O. (2007). Ethylene responsive element binding protein 1 (StEREBP1) from Solanum tuberosum increases tolerance to abiotic stress in transgenic potato plants. Biochemical and Biophysical Research Communications, 353(4), 863-868. doi:10.1016/j.bbrc.2006.12.095

Lijavetzky, D., Carbonero, P., & Vicente-Carbajosa, J. (2003). BMC Evolutionary Biology, 3(1), 17. doi:10.1186/1471-2148-3-17

Livak, K. J., & Schmittgen, T. D. (2001). Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method. Methods, 25(4), 402-408. doi:10.1006/meth.2001.1262

Mackay, J. P., & Crossley, M. (1998). Zinc fingers are sticking together. Trends in Biochemical Sciences, 23(1), 1-4. doi:10.1016/s0968-0004(97)01168-7

Mena, M., Vicente-Carbajosa, J., Schmidt, R. J., & Carbonero, P. (1998). An endosperm-specific DOF protein from barley, highly conserved in wheat, binds to and activates transcription from the prolamin-box of a native B-hordein promoter in barley endosperm. The Plant Journal, 16(1), 53-62. doi:10.1046/j.1365-313x.1998.00275.x

Mizoguchi, T., Wright, L., Fujiwara, S., Cremer, F., Lee, K., Onouchi, H., … Coupland, G. (2005). Distinct Roles of GIGANTEA in Promoting Flowering and Regulating Circadian Rhythms in Arabidopsis. The Plant Cell, 17(8), 2255-2270. doi:10.1105/tpc.105.033464

Moreno-Risueno, M. Á., Martínez, M., Vicente-Carbajosa, J., & Carbonero, P. (2006). The family of DOF transcription factors: from green unicellular algae to vascular plants. Molecular Genetics and Genomics, 277(4), 379-390. doi:10.1007/s00438-006-0186-9

Moreno-Risueno, M. Á., Díaz, I., Carrillo, L., Fuentes, R., & Carbonero, P. (2007). The HvDOF19 transcription factor mediates the abscisic acid-dependent repression of hydrolase genes in germinating barley aleurone. The Plant Journal, 51(3), 352-365. doi:10.1111/j.1365-313x.2007.03146.x

Murashige, T., & Skoog, F. (1962). A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures. Physiologia Plantarum, 15(3), 473-497. doi:10.1111/j.1399-3054.1962.tb08052.x

Nakagawa, T., Kurose, T., Hino, T., Tanaka, K., Kawamukai, M., Niwa, Y., … Kimura, T. (2007). Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation. Journal of Bioscience and Bioengineering, 104(1), 34-41. doi:10.1263/jbb.104.34

Oñate-Sánchez, L., & Vicente-Carbajosa, J. (2008). DNA-free RNA isolation protocols for Arabidopsis thaliana, including seeds and siliques. BMC Research Notes, 1(1), 93. doi:10.1186/1756-0500-1-93

ORELLANA, S., YAÑEZ, M., ESPINOZA, A., VERDUGO, I., GONZÁLEZ, E., RUIZ-LARA, S., & CASARETTO, J. A. (2010). The transcription factor SlAREB1 confers drought, salt stress tolerance and regulates biotic and abiotic stress-related genes in tomato. Plant, Cell & Environment, 33(12), 2191-2208. doi:10.1111/j.1365-3040.2010.02220.x

Papi, M., Sabatini, S., Altamura, M. M., Hennig, L., Schäfer, E., Costantino, P., & Vittorioso, P. (2002). Inactivation of the Phloem-Specific Dof Zinc Finger GeneDAG1 Affects Response to Light and Integrity of the Testa of Arabidopsis Seeds. Plant Physiology, 128(2), 411-417. doi:10.1104/pp.010488

Pinheiro, C., & Chaves, M. M. (2010). Photosynthesis and drought: can we make metabolic connections from available data? Journal of Experimental Botany, 62(3), 869-882. doi:10.1093/jxb/erq340

Pnueli, L. (2001). Tomato SP-Interacting Proteins Define a Conserved Signaling System That Regulates Shoot Architecture and Flowering. THE PLANT CELL ONLINE, 13(12), 2687-2702. doi:10.1105/tpc.13.12.2687

Rajasekaran, L. R., Aspinall, D., & Paleg, L. G. (2000). Physiological mechanism of tolerance of Lycopersicon spp. exposed to salt stress. Canadian Journal of Plant Science, 80(1), 151-159. doi:10.4141/p99-003

Rizhsky, L., Liang, H., Shuman, J., Shulaev, V., Davletova, S., & Mittler, R. (2004). When Defense Pathways Collide. The Response of Arabidopsis to a Combination of Drought and Heat Stress. Plant Physiology, 134(4), 1683-1696. doi:10.1104/pp.103.033431

Rueda-López, M., Crespillo, R., Cánovas, F. M., & Ávila, C. (2008). Differential regulation of two glutamine synthetase genes by a single Dof transcription factor. The Plant Journal, 56(1), 73-85. doi:10.1111/j.1365-313x.2008.03573.x

Sawa, M., Nusinow, D. A., Kay, S. A., & Imaizumi, T. (2007). FKF1 and GIGANTEA Complex Formation Is Required for Day-Length Measurement in Arabidopsis. Science, 318(5848), 261-265. doi:10.1126/science.1146994

Seki, M., Umezawa, T., Urano, K., & Shinozaki, K. (2007). Regulatory metabolic networks in drought stress responses. Current Opinion in Plant Biology, 10(3), 296-302. doi:10.1016/j.pbi.2007.04.014

Shannon, M. C., & Grieve, C. M. (1998). Tolerance of vegetable crops to salinity. Scientia Horticulturae, 78(1-4), 5-38. doi:10.1016/s0304-4238(98)00189-7

Shaw, L. M., McIntyre, C. L., Gresshoff, P. M., & Xue, G.-P. (2009). Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulation. Functional & Integrative Genomics, 9(4), 485-498. doi:10.1007/s10142-009-0130-2

Shelp, B. J., Bown, A. W., & Faure, D. (2006). Extracellular γ-Aminobutyrate Mediates Communication between Plants and Other Organisms. Plant Physiology, 142(4), 1350-1352. doi:10.1104/pp.106.088955

Shelp, B. (1999). Metabolism and functions of gamma-aminobutyric acid. Trends in Plant Science, 4(11), 446-452. doi:10.1016/s1360-1385(99)01486-7

Skirycz, A., Jozefczuk, S., Stobiecki, M., Muth, D., Zanor, M. I., Witt, I., & Mueller-Roeber, B. (2007). Transcription factor AtDOF4;2 affects phenylpropanoid metabolism in Arabidopsis thaliana. New Phytologist, 175(3), 425-438. doi:10.1111/j.1469-8137.2007.02129.x

Skirycz, A., Reichelt, M., Burow, M., Birkemeyer, C., Rolcik, J., Kopka, J., … Witt, I. (2006). DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis. The Plant Journal, 47(1), 10-24. doi:10.1111/j.1365-313x.2006.02767.x

Suárez-López, P., Wheatley, K., Robson, F., Onouchi, H., Valverde, F., & Coupland, G. (2001). CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature, 410(6832), 1116-1120. doi:10.1038/35074138

Sun, S.-J., Guo, S.-Q., Yang, X., Bao, Y.-M., Tang, H.-J., Sun, H., … Zhang, H.-S. (2010). Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice. Journal of Experimental Botany, 61(10), 2807-2818. doi:10.1093/jxb/erq120

Takada, S., & Goto, K. (2003). TERMINAL FLOWER2, an Arabidopsis Homolog of HETEROCHROMATIN PROTEIN1, Counteracts the Activation of FLOWERING LOCUS T by CONSTANS in the Vascular Tissues of Leaves to Regulate Flowering Time. The Plant Cell, 15(12), 2856-2865. doi:10.1105/tpc.016345

Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., & Kumar, S. (2011). MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 28(10), 2731-2739. doi:10.1093/molbev/msr121

Thompson, J. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25(24), 4876-4882. doi:10.1093/nar/25.24.4876

Uzun, S. (2006). The quantitative effects of temperature and light on the number of leaves preceding the first fruiting inflorescence on the stem of tomato (Lycopersicon esculentum, Mill.) and aubergine (Solanum melongena L.). Scientia Horticulturae, 109(2), 142-146. doi:10.1016/j.scienta.2006.04.006

Valverde, F. (2004). Photoreceptor Regulation of CONSTANS Protein in Photoperiodic Flowering. Science, 303(5660), 1003-1006. doi:10.1126/science.1091761

Vicente-Carbajosa, J., Moose, S. P., Parsons, R. L., & Schmidt, R. J. (1997). A maize zinc-finger protein binds the prolamin box in zein gene promoters and interacts with the basic leucine zipper transcriptional activator Opaque2. Proceedings of the National Academy of Sciences, 94(14), 7685-7690. doi:10.1073/pnas.94.14.7685

Wang, H.-W., Zhang, B., Hao, Y.-J., Huang, J., Tian, A.-G., Liao, Y., … Chen, S.-Y. (2007). The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants. The Plant Journal, 52(4), 716-729. doi:10.1111/j.1365-313x.2007.03268.x

Washio, K. (2001). Identification of Dof proteins with implication in the gibberellin-regulated expression of a peptidase gene following the germination of rice grains. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1520(1), 54-62. doi:10.1016/s0167-4781(01)00251-2

Wei, X., Chen, M., Xiao, J., Liu, Y., Yu, L., Zhang, H., & Wang, Y. (2010). Composition and bioactivity of tea flower polysaccharides obtained by different methods. Carbohydrate Polymers, 79(2), 418-422. doi:10.1016/j.carbpol.2009.08.030

Weltmeier, F., Ehlert, A., Mayer, C. S., Dietrich, K., Wang, X., Schütze, K., … Dröge-Laser, W. (2006). Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors. The EMBO Journal, 25(13), 3133-3143. doi:10.1038/sj.emboj.7601206

Wigge, P. A. (2005). Integration of Spatial and Temporal Information During Floral Induction in Arabidopsis. Science, 309(5737), 1056-1059. doi:10.1126/science.1114358

Wu, L., Chen, X., Ren, H., Zhang, Z., Zhang, H., Wang, J., … Huang, R. (2007). ERF protein JERF1 that transcriptionally modulates the expression of abscisic acid biosynthesis-related gene enhances the tolerance under salinity and cold in tobacco. Planta, 226(4), 815-825. doi:10.1007/s00425-007-0528-9

Yamamoto, M. P., Onodera, Y., Touno, S. M., & Takaiwa, F. (2006). Synergism between RPBF Dof and RISBZ1 bZIP Activators in the Regulation of Rice Seed Expression Genes. Plant Physiology, 141(4), 1694-1707. doi:10.1104/pp.106.082826

Yanagisawa, S. (1997). Dof DNA-Binding Domains of Plant Transcription Factors Contribute to Multiple Protein-Protein Interactions. European Journal of Biochemistry, 250(2), 403-410. doi:10.1111/j.1432-1033.1997.0403a.x

Yanagisawa, S. (2001). The Transcriptional Activation Domain of the Plant-Specific Dof1 Factor Functions in Plant, Animal, and Yeast Cells. Plant and Cell Physiology, 42(8), 813-822. doi:10.1093/pcp/pce105

Yanagisawa, S. (2002). The Dof family of plant transcription factors. Trends in Plant Science, 7(12), 555-560. doi:10.1016/s1360-1385(02)02362-2

Yanagisawa, S. (2004). Dof Domain Proteins: Plant-Specific Transcription Factors Associated with Diverse Phenomena Unique to Plants. Plant and Cell Physiology, 45(4), 386-391. doi:10.1093/pcp/pch055

Yanagisawa, S., Akiyama, A., Kisaka, H., Uchimiya, H., & Miwa, T. (2004). Metabolic engineering with Dof1 transcription factor in plants: Improved nitrogen assimilation and growth under low-nitrogen conditions. Proceedings of the National Academy of Sciences, 101(20), 7833-7838. doi:10.1073/pnas.0402267101

Yanagisawa, S., & Schmidt, R. J. (1999). Diversity and similarity among recognition sequences of Dof transcription factors. The Plant Journal, 17(2), 209-214. doi:10.1046/j.1365-313x.1999.00363.x

Yanagisawa, S., & Sheen, J. (1998). Involvement of Maize Dof Zinc Finger Proteins in Tissue-Specific and Light-Regulated Gene Expression. The Plant Cell, 10(1), 75-89. doi:10.1105/tpc.10.1.75

Yáñez, M., Cáceres, S., Orellana, S., Bastías, A., Verdugo, I., Ruiz-Lara, S., & Casaretto, J. A. (2009). An abiotic stress-responsive bZIP transcription factor from wild and cultivated tomatoes regulates stress-related genes. Plant Cell Reports, 28(10), 1497-1507. doi:10.1007/s00299-009-0749-4

Yang, J., Yang, M.-F., Zhang, W.-P., Chen, F., & Shen, S.-H. (2011). A putative flowering-time-related Dof transcription factor gene, JcDof3, is controlled by the circadian clock in Jatropha curcas. Plant Science, 181(6), 667-674. doi:10.1016/j.plantsci.2011.05.003

Yoo, S. K., Chung, K. S., Kim, J., Lee, J. H., Hong, S. M., Yoo, S. J., … Ahn, J. H. (2005). CONSTANS Activates SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 through FLOWERING LOCUS T to Promote Flowering in Arabidopsis. Plant Physiology, 139(2), 770-778. doi:10.1104/pp.105.066928

Zhang, B., Chen, W., Foley, R. C., Büttner, M., & Singh, K. B. (1995). Interactions between distinct types of DNA binding proteins enhance binding to ocs element promoter sequences. The Plant Cell, 7(12), 2241-2252. doi:10.1105/tpc.7.12.2241

Zhu, J.-K. (2001). Plant salt tolerance. Trends in Plant Science, 6(2), 66-71. doi:10.1016/s1360-1385(00)01838-0

Zhu, J.-K. (2003). Regulation of ion homeostasis under salt stress. Current Opinion in Plant Biology, 6(5), 441-445. doi:10.1016/s1369-5266(03)00085-2

Zou, H.-F., Zhang, Y.-Q., Wei, W., Chen, H.-W., Song, Q.-X., Liu, Y.-F., … Chen, S.-Y. (2012). The transcription factor AtDOF4.2 regulates shoot branching and seed coat formation in Arabidopsis. Biochemical Journal, 449(2), 373-388. doi:10.1042/bj20110060






This item appears in the following Collection(s)

Show full item record