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Mapping QTLs associated with fruit quality traits in peach Prunus persica (L.) Batsch using SNP maps

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Mapping QTLs associated with fruit quality traits in peach Prunus persica (L.) Batsch using SNP maps

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dc.contributor.author Zeballos, Jose Luis es_ES
dc.contributor.author Adibi, Walid es_ES
dc.contributor.author Giménez Millán, Rosalia es_ES
dc.contributor.author Monforte Gilabert, Antonio José es_ES
dc.contributor.author Moreno, María Angeles es_ES
dc.contributor.author Gogorcena, Yolanda es_ES
dc.date.accessioned 2017-07-03T10:50:22Z
dc.date.available 2017-07-03T10:50:22Z
dc.date.issued 2016-06
dc.identifier.issn 1614-2942
dc.identifier.uri http://hdl.handle.net/10251/84336
dc.description.abstract [EN] Fruit quality is an essential criterion used to select new cultivars in peach breeding programs and is determined based on a combination of organoleptic and nutritional traits. The aim of this study was to identify quantitative trait loci (QTLs) for fruit quality traits in an F-1 nectarine population derived from 'Venus' and 'Big Top' cultivars. The progeny were evaluated over 4 years for agronomical and biochemical characteristics and genotyped using simple sequence repeat (SSR) markers and 'IPSC 9K peach SNP array v1'. Two genetic maps were constructed using 411 markers. The 'Venus' map spanned 259 cM on nine linkage groups (LGs) with 104 markers. The 'Big Top' map spanned 464 cM on 10 LGs with 122 markers. Single or Multiple QTL models mapping was applied separately for each year and all years combined. A total of 54 QTLs mapped over 12 LGs belonged to seven peach chromosomes. Most of the QTLs were consistent over the 4 years of study and were validated with the multi-year analysis. QTLs for total phenolic, flavonoid, and anthocyanin contents were reported for the first time in peach. LG 4 in 'Venus' and LG 5 in 'Big Top' showed the highest numbers of QTLs. This work represents the first study in an F-1 nectarine family to identify peach genomic regions that control fruit quality traits using 'IPSC 9K SNP array v1' and provides useful information for marker-assisted breeding to produce peaches with better antioxidant content and healthy attributes. es_ES
dc.description.sponsorship We are grateful to C.H. Crisosto (University of California, Davis) for providing SSR markers (UCDCH15 and BINEPPCU6377). We thank E. Sierra and S. Segura for the technical assistance and plant management in the field and N. Ksouri for the bioinformatic assistance. We are grateful to A. Casas and E. Igartua for the assistance and support with the statistical analysis using JoinMap (R) 4 software. This study was funded by the Spanish Ministry of Economy and Competitiveness (MINECO) grants AGL-2008-00283, AGL2011-24576, and AGL2014-52063-R and was co-funded by the FEDER and the Regional Government of Aragon (A44) with European Social Fund. W. Abidi was supported by a JAE-Pre fellowship from the Consejo Superior de Investigaciones Cientificas (CSIC), which enabled him to visit the University of California, Davis, and the IBMCP, Valencia, Spain. J.L. Zeballos received a master fellow funded by the Spanish Agency for International Cooperation and Development (AECID).
dc.language Inglés es_ES
dc.publisher Springer Verlag (Germany) es_ES
dc.relation.ispartof Tree Genetics and Genomes es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject Peach physical map es_ES
dc.subject Vitamin C es_ES
dc.subject Total phenolics es_ES
dc.subject Flavonoids es_ES
dc.subject Anthocyanins es_ES
dc.subject Sugars es_ES
dc.title Mapping QTLs associated with fruit quality traits in peach Prunus persica (L.) Batsch using SNP maps es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1007/s11295-016-0996-9
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//AGL2008-00283/ES/MEJORA, SELECCION Y ANALISIS GENETICO EN PATRONES PRUNUS Y VARIEDADES DE MELOCOTONERO/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//AGL2011-24576/ES/MEJORA Y ANALISIS GENETICO EN PATRONES PRUNUS Y VARIEDADES DE MELOCOTONERO, CON ESPECIAL ENFASIS EN ESTRESES ABIOTICOS Y CALIDAD DEL FRUTO/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MINECO//AGL2014-52063-R/ES/MEJORA GENETICA DE PATRONES PRUNUS Y VARIEDADES DE MELOCOTONERO/
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes es_ES
dc.description.bibliographicCitation Zeballos, JL.; Adibi, W.; Giménez Millán, R.; Monforte Gilabert, AJ.; Moreno, MA.; Gogorcena, Y. (2016). Mapping QTLs associated with fruit quality traits in peach Prunus persica (L.) Batsch using SNP maps. Tree Genetics and Genomes. 12(3):1-17. https://doi.org/10.1007/s11295-016-0996-9 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion http://doi.org/10.1007/s11295-016-0996-9 es_ES
dc.description.upvformatpinicio 1 es_ES
dc.description.upvformatpfin 17 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 12 es_ES
dc.description.issue 3 es_ES
dc.relation.senia 331645 es_ES
dc.identifier.eissn 1614-2950
dc.contributor.funder Ministerio de Ciencia e Innovación
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