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Experimental and Modeling Analysis of Synechocystis sp. PCC 6803 growth

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Experimental and Modeling Analysis of Synechocystis sp. PCC 6803 growth

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dc.contributor.author Lopo, Miguel es_ES
dc.contributor.author Montagud, Arnau es_ES
dc.contributor.author Navarro-Peris, Emilio es_ES
dc.contributor.author Cunha, Isabel es_ES
dc.contributor.author Zille, Andrea es_ES
dc.contributor.author Fernández de Córdoba Castellá, Pedro José es_ES
dc.contributor.author Moradas-Ferreira, Pedro es_ES
dc.contributor.author Tamagnini, Paula es_ES
dc.contributor.author Urchueguía Schölzel, Javier Fermín es_ES
dc.date.accessioned 2017-07-13T13:46:10Z
dc.date.available 2017-07-13T13:46:10Z
dc.date.issued 2012-07
dc.identifier.issn 1464-1801
dc.identifier.uri http://hdl.handle.net/10251/85106
dc.description.abstract [EN] Background/Aims: The influence of different parameters such as temperature, irradiance, nitrate concentration, pH, and an external carbon source on Synechocystis PCC 6803 growth was evaluated. Methods: 4.5-ml cuvettes containing 2 ml of culture, a high-throughput system equivalent to batch cultures, were used with gas exchange ensured by the use of a Parafilm TM cover. The effect of the different variables on maximum growth was assessed by a multi-way statistical analysis. Results: Temperature and pH were identified as the key factors. It was observed that Synechocystis cells have a strong influence on the external pH. The optimal growth temperature was 33 ° C while light-saturating conditions were reached at 40 E m –2 s –1 . Conclusion: It was demonstrated that Synechocystis exhibits a marked difference in behavior between autotrophic and glucose-based mixotrophic conditions, and that nitrate concentrations did not have a significant influence, probably due to endogenous nitrogen reserves. Furthermore, a dynamic metabolic model of Synechocystis photosynthesis was developed to gain insights on the underlying mechanism enabling this cyanobacterium to control the levels of external pH. The model showed a coupled effect between the increase of the pH and ATP production which in turn allows a higher carbon fixation rate. es_ES
dc.description.sponsorship This work was financially supported by FCT (SFRH/BPD/37045/2007), POCI 2010 (III Quadro Comunitario de Apoio), Generalitat Valenciana (BFPI/2007/283), Ministerio de Educacion y Ciencia de Espana through the program Juan de la Cierva and project ArtBioCom (TIN2009-12359), EU FP7-KB-BE-2007 project TarPol (contract No. 212894), EU FP6-NEST-2005 project BioModularH2 (contract No. 043340), and AccOes Integradas Luso-Espanholas 2009 (E-44/09). en_EN
dc.language Inglés es_ES
dc.publisher Karger Publishers es_ES
dc.relation.ispartof Journal of Molecular Microbiology and Biotechnology es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject Cyanobacteria es_ES
dc.subject Dynamic flux balance analysis es_ES
dc.subject Growth es_ES
dc.subject PH es_ES
dc.subject Synechocystis es_ES
dc.subject.classification MATEMATICA APLICADA es_ES
dc.subject.classification FISICA APLICADA es_ES
dc.subject.classification MAQUINAS Y MOTORES TERMICOS es_ES
dc.title Experimental and Modeling Analysis of Synechocystis sp. PCC 6803 growth es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1159/000336850
dc.relation.projectID info:eu-repo/grantAgreement/EC/FP7/212894/EU/Targeting environmental pollution with engineered microbial systems á la carte/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/Generalitat Valenciana//BFPI%2F2007%2F283/ES/BFPI%2F2007%2F283/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MICINN//TIN2009-12359/ES/Integracion De Bases De Datos Biologicas Con Nuevas Herramientas De Computo En Biologia Sintetica Orientadas A La Produccion De Biocombustibles/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/FCT/SFRH/SFRH%2FBPD%2F37045%2F2007/PT/REMOVAL OF HEAVY METALS FROM POLLUTED WATERS USING CYANOBACTERIAL EXOPOLYSACCHARIDE (EPS)/
dc.relation.projectID info:eu-repo/grantAgreement/IBMC//FP6-NEST-2005-PATH-SYN-043340-BIOMODULARH2/ES/Engineered Modular Bacterial Hydrogen Photoproduction of Hydrogen/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/FCT/Acções Integradas Luso-Espanholas/E-44%2F09/ES/ es_ES
dc.rights.accessRights Cerrado es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario de Matemática Pura y Aplicada - Institut Universitari de Matemàtica Pura i Aplicada es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Física Aplicada - Departament de Física Aplicada es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Termodinámica Aplicada - Departament de Termodinàmica Aplicada es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Matemática Aplicada - Departament de Matemàtica Aplicada es_ES
dc.description.bibliographicCitation Lopo, M.; Montagud, A.; Navarro-Peris, E.; Cunha, I.; Zille, A.; Fernández De Córdoba Castellá, PJ.; Moradas-Ferreira, P.... (2012). Experimental and Modeling Analysis of Synechocystis sp. PCC 6803 growth. Journal of Molecular Microbiology and Biotechnology. 22(2):71-82. https://doi.org/10.1159/000336850 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion http://dx.doi.org/10.1159/000336850 es_ES
dc.description.upvformatpinicio 71 es_ES
dc.description.upvformatpfin 82 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 22 es_ES
dc.description.issue 2 es_ES
dc.relation.senia 231971 es_ES
dc.contributor.funder European Commission
dc.contributor.funder Ministerio de Educación y Ciencia
dc.contributor.funder Generalitat Valenciana
dc.contributor.funder Ministerio de Ciencia e Innovación
dc.contributor.funder Fundação para a Ciência e a Tecnologia, Portugal


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