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Browsing by Subject "Phylogeny"

Now showing items 1-20 of 21

A meta-analysis reveals the commonalities and differences in Arabidopsis thaliana response to different viral pathogens

Rodrigo Tarrega, Guillermo; Carrera Montesinos, Javier; Ruiz-Ferrer, Virginia; Del Toro, F.J.; Llave, C; Voinnet, O.; Elena Fito, Santiago Fco (Public Library of Science, 2012-07)

Understanding the mechanisms by which plants trigger host defenses in response to viruses has been a challenging problem owing to the multiplicity of factors and complexity of interactions involved. The advent of genomic ...
Análisis filogenético y sensibilidad a metalaxil de aislados de Phytophthora relacionados con el cultivo de almendro (Prunus dulcis Mill.)

Echavarri Diez, Garazi Ananda (Universitat Politècnica de València, 2020-09-04)

[ES] Desde la última década, el cultivo del almendro está experimentando importantes cambios, con un incremento continuo de la superficie de cultivo. Gran parte de las nuevas plantaciones se ha establecido bajo un régimen ...
Botryosphaeriaceae species associated with diseased loquat trees in Italy and description of Diplodia rosacearum sp. nov

Giambra, S.; Piazza, G.; Alves, A.; Mondello, V.; Berbegal Martinez, Monica; Armengol Fortí, Josep; Burruano, S. (Mushroom Research Foundation, 2016)

[EN] Loquat (Eriobotrya japonica) is a fruit tree cultivated in several countries in the Mediterranean region. A survey of a loquat orchard in Sicily ( Italy) revealed the presence of plants showing dieback symptoms and ...
Cell Wall Remodeling in Abscission Zone Cells during Ethylene-Promoted Fruit Abscission in Citrus

Merelo, P.; Agusti, J.; Arbona, V.; Costa, M.L.; Hueso Estornell, Leandro; Gómez-Cadenas, Aurelio; Coimbra, S.; Gómez Jiménez, Maria Dolores; Perez Amador, Miguel Angel; Domingo, C.; Talón, M.; Tadeo, F.R. (Frontiers Media SA, 2017-02-08)

[EN] Abscission is a cell separation process by which plants can shed organs such as fruits, leaves, or flowers. The process takes place in specific locations termed abscission zones. In fruit crops like citrus, fruit ...
Characterization and pathogenicity of Cylindrocarpon-like asexual morphs associated with black foot disease in algerian grapevine nurseries, with the description of Pleiocarpon algeriense sp. nov

Aigoun-Mouhous, Wassila; Elena-Jiménez, Georgina; Cabral, Ana; León Santana, Maela; Sabaou, Nasserdine; Armengol Fortí, Josep; Chaouia, Cherifa; Mahamedi, Alla Eddine; Berraf-Tebbal, Akila (Springer-Verlag, 2019-08)

[EN] During a survey of black foot disease in Algerian grapevine nurseries, a collection of 79 Cylindrocarpon-like isolates were obtained. Based on morphology and DNA sequence data of histone H3 (his3), three species of ...
CHARACTERIZATION OF A NEW SPANISH POTATO VIRUS X STRAIN INDUCING SYMPTOMS IN TOMATO

Cueto-Guinzo, A.I.; Aparisi, F.; Anchon, M.A.; Pallás Benet, Vicente; Arcal, L.; Lade, S.; Medina, V. (Edizioni ETS, 2015-07)

Potato virus X (PVX), one of the most common plant viruses causing disease to solanaceous crops around the world, is usually asymptomatic in tomato. After mechanical inoculation, a PVX isolate from Northeastern Spain ...
Characterization of Botryosphaeriaceae species associated with diseased loquat (Eriobotrya japonica) in Spain

González Domínguez, Elisa; Alves, A.; León Santana, Maela; Armengol Fortí, Josep (Blackwell Publishing, 2017-01)

[EN] Loquat (Eriobotrya japonica) is an important subtropical fruit crop in Spain and other Mediterranean countries. In recent years, characteristic symptoms of branch canker and dieback have been observed in the main ...
Evolutionary analysis of Citrus tristeza virus outbreaks in Calabria, Italy: two rapidly spreading and independent introductions of mild and severe isolates

Fontana, A.; Debreczeni, Diana Elvira; Albanese, G.; Davino, Salvatore; Flores Pedauye, Ricardo; Rubio, L. (Springer Verlag (Germany), 2014-11)

The evolution of citrus tristeza virus (CTV) from outbreaks occurred in Calabria, Italy, was compared with that of CTV outbreaks reported previously in another two proximal Italian regions, Sicily and Apulia. Examination ...
Evolutionary analysis of tomato Sw-5 resistance breaking isolates of Tomato spotted wilt virus

López Del Rincón, Carmelo; Aramburu, J.; Galipienso, L.; Soler Aleixandre, Salvador; Nuez Viñals, Fernando; Rubio, L. (Society for General Microbiology, 2011-01)

[EN] Tomato spotted wilt virus (TSWV) causes severe economic losses in many crops worldwide and often overcomes resistant cultivars used for disease control. Comparison of nucleotide and amino acid sequences suggested that ...
Evolutionary ecology of hares (Lepus spp.) from northwestern Africa; The problem of cryptic species and the description of a new species (Lepus saharae sp. nov.)

Soria-Boix, Carmen; Donat-Torres, Maria P.; Rguibi Idrissi, Hamid; Urios, Vicente (2019-09)

[EN] Objective: We examine the different pressures that lead to the occurrence of new species and thus to their phylogenies. From an evolutionary ecology perspective, we examine the phylogenetic relationships of different ...
Genetic variability and evolutionary analyses of the coat protein gene of Tomato mosaic virus

Rangel, Ezequiel; Alfaro Fernández, Ana Olvido; Font San Ambrosio, Maria Isabel; Luis-Arteaga, M.; Rubio, Luis (Springer Verlag (Germany), 2011-12)

[EN] Tomato mosaic virus (ToMV), a member of the genus Tobamovirus, infects several ornamental and horticultural crops worldwide. In this study, the nucleotide sequences of the coat protein gene of worldwide ToMV isolates ...
Gibberellin A1 metabolism contributes to the control of photoperiod mediated tuberization in potato

Bou-Torrent, J; Martinez-Garcia, J.F; Garcia Martinez, Jose L; Prat, Salomé (Public Library of Science, 2011)

[EN] Some potato species require a short-day (SD) photoperiod for tuberization, a process that is negatively affected by gibberellins (GAs). Here we report the isolation of StGA3ox2, a gene encoding a GA 3-oxidase, whose ...
Isolation an didentification of actinomycetes from a compost-anended soil with potetial as biocontrol agents

Cuesta Amat, Gonzalo; García de la Fuente, Rosana; Abad Berjón, Manuel; Fornes Sebastiá, Fernando (Elsevier, 2012-03)

The search for new biocontrol strategies to inhibit the growth of phytopathogenic microorganisms has become widely widespread due to environmental concerns. Among actinomycetes, Streptomyces species have been extensively ...
Large-scale gene gains and losses molded the NLR defense arsenal during the Cucurbita evolution

Andolfo, Guisseppe; Sáez-Sánchez, Cristina; Cañizares Sales, Joaquín; Picó Sirvent, María Belén; Ercolano, Maria R. (Springer-Verlag, 2021-10)

[EN] Main conclusion Genome-wide annotation reveals that the gene birth-death process of the Cucurbita R family is associated with a species-specific diversification of TNL and CNL protein classes. The Cucurbitaceae family ...
New approach for phylogenetic tree recovery based on genome-scale metabolic networks

Gamermann, Daniel; Montagud Aquino, Arnau; Conejero Casares, José Alberto; Urchueguía Schölzel, Javier Fermín; Fernández de Córdoba Castellá, Pedro José (Mary Ann Liebert, 2014-07)

[EN] A wide range of applications and research has been done with genome-scale metabolic models. In this work, we describe an innovative methodology for comparing metabolic networks constructed from genome-scale metabolic ...
Organización de la diversidad genética de los cítricos

García Lor, Andrés (Universitat Politècnica de València, 2013-07-29)

Citrus es el género de la subfamilia Aurantioideae de mayor importancia económica. Su origen es la región sureste de Asia, en un área que incluye China, India y la península de Indochina y los archipiélagos de los ...
Secuenciación, ensamblaje y evaluación funcional del genoma de la especie Blautia spp., aislado del tracto intestinal humano y con potencial anti-inflamatorio

Casado García-Consuegra, Jaime (Universitat Politècnica de València, 2022-10-21)

[ES] La investigación en el campo del microbioma humano ha permitido dilucidar el gran impacto que tienen en nuestra salud los microbios que habitan en nuestro tracto digestivo. Las intereacciones dieta-hospedador microbiota ...
The abscission regulatory module INFLORESCENCE DEFICIENT IN ABSCISSION (IDA) / HAESA (HAE)-like receptor kinases in Solanaceae species: Functional analysis in Nicotiana benthamiana

Ventimilla Llora, Daniel (Universitat Politècnica de València, 2021-06-10)

[ES] La abscisión es un proceso de separación celular activo, organizado y altamente coordinado que permite el desprendimiento de órganos vegetativos y reproductivos completos, mediante la modificación de la adhesión celular ...
The first de novo transcriptome of pepino (Solanum muricatum): assembly, comprehensive analysis and comparison with the closely related species S. caripense, potato and tomato

Herraiz García, Francisco Javier; Blanca Postigo, José Miguel; Ziarsolo Areitioaurtena, Pello; Gramazio, Pietro; Plazas Ávila, María de la O; Anderson, Gregory Joseph; Prohens Tomás, Jaime; Vilanova Navarro, Santiago (Springer (Biomed Central Ltd.), 2016)

[EN] Background Solanum sect. Basarthrum is phylogenetically very close to potatoes (Solanum sect. Petota) and tomatoes (Solanum sect. Lycopersicon), two groups with great economic importance, and for which Solanum sect. ...
The Gypsy Database (GyDB) of mobile genetic elements: release 2.0

Llorens, Carlos; Futami, Ricardo; Covelli, Laura; Domínguez-Escriba, Laura; Viu, Jose M.; Tamarit, Daniel; Aguilar-Rodríguez, Jose; Vicente Ripollés, Miguel; Fuster, Gonzalo; Bernet, Guillermo P; Maumus, Florian; Munoz-Pomer, Alfonso; Sempere Luna, José María; Latorre, Amparo; Moya, Andres (Oxford University Press (OUP): Policy C - Option B, 2011)

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic ...