GyDB mobilomics: LTR retroelements and integrase-related transposons of the pea aphid Acyrthosiphon pisum genome

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dc.contributor.affiliationDepartamento de Sistemas Informáticos y Computación
dc.contributor.affiliationEscuela Técnica Superior de Ingeniería Informática
dc.contributor.affiliationInstituto Universitario Valenciano de Investigación en Inteligencia Artificial
dc.contributor.authorBernet, Guillermo P.es_ES
dc.contributor.authorMuñoz-Pomer, Alfonsoes_ES
dc.contributor.authorDomínguez-Escribá, Lauraes_ES
dc.contributor.authorCovelli, Lauraes_ES
dc.contributor.authorBernad, Lucíaes_ES
dc.contributor.authorRamasamy, Sukanyaes_ES
dc.contributor.authorFutami, Ricardoes_ES
dc.contributor.authorSempere Luna, José María
dc.contributor.authorMoya, Andréses_ES
dc.contributor.authorLlorens, Carloses_ES
dc.contributor.funderMinisterio de Ciencia e Innovación
dc.contributor.funderGeneralitat Valenciana
dc.date.accessioned2014-05-21T10:39:13Z
dc.date.available2014-05-21T10:39:13Z
dc.date.issued2011
dc.description.abstract[EN] The Gypsy Database concerning Mobile Genetic Elements (release 2.0) is a wiki-style project devoted to the phylogenetic classification of LTR retroelements and their viral and host gene relatives characterized from distinct organisms. Furthermore, GyDB 2.0 is concerned with studying mobile elements within genomes. Therefore, an in-progress repository was created for databases with annotations of mobile genetic elements from particular genomes. This repository is called Mobilomics and the first uploaded database contains 549 LTR retroelements and related transposases which have been annotated from the genome of the Pea aphid Acyrthosiphon pisum. Mobilomics is accessible from the GyDB 2.0 project using the URL: http://gydb.org/index.php/Mobilomics.en_EN
dc.description.accrualMethodSes_ES
dc.description.bibliographicCitationBernet, GP.; Muñoz-Pomer, A.; Domínguez-Escribá, L.; Covelli, L.; Bernad, L.; Ramasamy, S.; Futami, R.... (2011). GyDB mobilomics: LTR retroelements and integrase-related transposons of the pea aphid Acyrthosiphon pisum genome. Mobile Genetic Elements. 1(2):97-102. https://doi.org/10.4161/mge.1.2.17635es_ES
dc.description.issue2es_ES
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dc.description.sponsorshipWe thank Denys Wheatley and Angela Panther from Biomedes for copyediting of this article, which was partially supported by Grants IDI-20100007 from CDTI (Centro de Desarrollo Tecnológico Industrial), IMIDTA/2009/118 from IMPIVA and ERDF (European Regional Development Fund), Torres-Quevedo Grants PTQ-09-01-00020, and PTQ10-03552 from MICINN (Ministerio de Ciencia e Innovación) and grant Prometeo/2009/092 (Conselleria d’Educació, Generalitat Valenciana, Spain).
dc.description.upvformatpfin102es_ES
dc.description.upvformatpinicio97es_ES
dc.description.volume1es_ES
dc.identifier.doi10.4161/mge.1.2.17635
dc.identifier.issn2159-2543
dc.identifier.urihttps://riunet.upv.es/handle/10251/37645
dc.languageIngléses_ES
dc.publisherLandes Biosciencees_ES
dc.relation.ispartofMobile Genetic Elementses_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/MICINN//IDI-20100007/ES/PROYECTO GYPSY DATABASE: LA BASE DE DATOS COLABORATIVA DE ELEMENTOS GENÉTICOS MÓVILES/es_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/GVA//IMIDTA%2F2009%2F118/ES/Gypsy Database Project And Biotechvana Bioinformatics Ii/es_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/MICINN//PTQ-09-01-00020/ES/PTQ-09-01-00020/es_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/MICINN//PTQ-10-03552/ES/PTQ-10-03552/es_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/GVA//PROMETEO%2F2009%2F092/es_ES
dc.relation.publisherversionhttps://www.landesbioscience.com/journals/mge/03BernetMGE1-2.pdfes_ES
dc.relation.references10.1093/nar/gkq1061es_ES
dc.relation.references10.1093/nar/25.17.3389es_ES
dc.relation.references10.1371/journal.pbio.1000313es_ES
dc.relation.references10.1111/j.1365-2583.2009.00930.xes_ES
dc.relation.references10.1093/nar/gkq1189es_ES
dc.relation.references10.1016/j.jmb.2008.10.045es_ES
dc.relation.references10.1128/JVI.02546-08es_ES
dc.relation.references10.1186/1471-2148-5-20es_ES
dc.relation.references10.1186/1745-6150-4-41es_ES
dc.relation.references10.1186/1471-2148-11-154es_ES
dc.relation.references10.1186/1759-8753-1-3es_ES
dc.relation.references10.1016/j.gene.2006.08.008es_ES
dc.relation.references10.1073/pnas.0600833103es_ES
dc.relation.references10.1023/A:1018300721953es_ES
dc.relation.references10.1093/oxfordjournals.molbev.a003947es_ES
dc.relation.references10.1093/nar/27.11.2408es_ES
dc.relation.references10.1093/molbev/msq072es_ES
dc.relation.references10.1016/j.tig.2005.01.006es_ES
dc.relation.references10.1038/embor.2008.256es_ES
dc.relation.references10.1093/bib/bbn017es_ES
dc.relation.senia217348
dc.rightsReserva de todos los derechoses_ES
dc.rights.accessRightsCerradoes_ES
dc.subjectMobilomees_ES
dc.subjectTy3/Gypsyes_ES
dc.subjectBel/Paoes_ES
dc.subjectGinger1es_ES
dc.subjectGinger2es_ES
dc.subjectCIN1es_ES
dc.subject.classificationLENGUAJES Y SISTEMAS INFORMATICOSes_ES
dc.subject.classificationORGANIZACION DE EMPRESASes_ES
dc.titleGyDB mobilomics: LTR retroelements and integrase-related transposons of the pea aphid Acyrthosiphon pisum genomees_ES
dc.typeArtículoes_ES
dc.type.versioninfo:eu-repo/semantics/publishedVersiones_ES
dspace.entity.typePublication
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