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Detection, molecular characterisation and aspects involving the transmission of tomato chlorotic dwarf viroid in eggplant

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Detection, molecular characterisation and aspects involving the transmission of tomato chlorotic dwarf viroid in eggplant

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dc.contributor.author Gramazio, Pietro es_ES
dc.contributor.author Lerma Lerma, María Dolores es_ES
dc.contributor.author Villanueva-Párraga, Gloria es_ES
dc.contributor.author Vilanova Navarro, Santiago es_ES
dc.contributor.author García-Fortea, Edgar es_ES
dc.contributor.author Mangino, Giulio es_ES
dc.contributor.author Figás-Moreno, María Del Rosario es_ES
dc.contributor.author Arrones-Olmo, Andrea es_ES
dc.contributor.author Alonso-Martín, David es_ES
dc.contributor.author San Bautista Primo, Alberto es_ES
dc.contributor.author Soler Aleixandre, Salvador es_ES
dc.contributor.author Prohens Tomás, Jaime es_ES
dc.contributor.author Plazas Ávila, María de la O es_ES
dc.date.accessioned 2020-05-07T05:57:02Z
dc.date.available 2020-05-07T05:57:02Z
dc.date.issued 2019-09 es_ES
dc.identifier.issn 0003-4746 es_ES
dc.identifier.uri http://hdl.handle.net/10251/142679
dc.description "This is the peer reviewed version of the following article: Gramazio P, Lerma MD, Villanueva G, et al. Detection, molecular characterisation and aspects involving the transmission of tomato chlorotic dwarf viroid in eggplant. Ann Appl Biol. 2019;175:172 183. https://doi.org/10.1111/aab.12527, which has been published in final form at https://doi.org/10.1111/aab.12527. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archiving." es_ES
dc.description.abstract [EN] Tomato chlorotic dwarf viroid (TCDVd) is a pospiviroid that causes severe disease symptoms in tomato. TCDVd is also naturally found in other crops and plants, in most occasions being asymptomatic. Apart from the natural hosts reported up to now, artificial inoculations have revealed that TCDVd can infect other plants, including eggplant (Solanum melongena). In a screening of seedlings of eggplant from a breeding programme we detected a pospiviroid, which we identified as TCDVd, representing the first report of natural infection of eggplant by TCDVd. The new TCDVd isolate of eggplant was detected by reverse transcription polymerase chain reaction (RT¿PCR) using primers TG21/CT20, initially designed to detect potato spindle tuber viroid. The new isolate sequence is close to a Brugmansia sanguinea isolate of TCDVd from the Netherlands, and most of the nucleotidic changes with respect to this isolate and to the reference genome sequence of TCDVd are found in the TR region. Naturally infected plants of eggplant with this TCDVd isolate did not display any disease symptoms. We demonstrated that in eggplant TCDVd is mechanically transmitted with low to moderate efficiency with cultivation practices, but not by plant¿to¿plant contact. Tomato plants artificially inoculated with the eggplant isolate of TCDVd tested positive for the presence of the viroid at 50¿days after inoculation, but did not display any disease symptoms. Seed transmission to germinated seedlings of eggplant was variable among progenies from infected plants, ranging from 7.7% to 100.0%. Disinfection of seeds with chemical treatments with sodium hypochlorite and trisodium phosphate solutions plus thermotherapy at 80°C for 24¿hr or 90°C for 6 hr was ineffective in reducing the rate of transmission by seed. We did not find evidence of horizontal transmission of TCDVd by pollen, but vertical transmission was highly efficient when healthy eggplant plants were pollinated with infected pollen. Our results indicate that asymptomatic infection of eggplant by TCDVd and high seed and pollen transmission rates may contribute to the spread of this viroid. The information we obtained is useful in order to implement measures for the prevention, control and eradication of TCDVd in eggplant crops, as well as to avoid their transmission to other hosts. es_ES
dc.description.sponsorship P.G. is grateful to Universitat Politècnica de València and to Japan Society for the Promotion of Science for their respective postdoctoral grants (PAID-10-18 and FY2019 JSPS Postdoctoral Fellowship for Research in Japan [Standard]). A.A. and D.A. are grateful to Universitat Politècnica de València for their respective predoctoral (PAID-01-18 and PAID-01-16) contracts within the Programa de Ayudas de Investigación y Desarrollo initiative. E.G.-F. is grateful to Ministerio de Educación, Cultura y Deporte para la Formación de Profesorado Universitario for a predoctoral grant (FPU17/02389). G.M. is grateful to Generalitat Valenciana for a predoctoral grant within the Santiago Grisolía programme (GRISOLIAP/2016/012). M.P. is grateful to Generalitat Valenciana and Fondo Social Europeo for a postdoctoral grant (APOSTD/2018/014). es_ES
dc.language Inglés es_ES
dc.publisher Blackwell Publishing es_ES
dc.relation.ispartof Annals of Applied Biology es_ES
dc.rights Reserva de todos los derechos es_ES
dc.subject Mechanical transmission es_ES
dc.subject Pollen transmission es_ES
dc.subject RT-PCR,seed disinfection es_ES
dc.subject Seed transmission es_ES
dc.subject Solanum melongena es_ES
dc.subject TCDVd es_ES
dc.subject Viroid sequence es_ES
dc.subject.classification GENETICA es_ES
dc.subject.classification PRODUCCION VEGETAL es_ES
dc.title Detection, molecular characterisation and aspects involving the transmission of tomato chlorotic dwarf viroid in eggplant es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1111/aab.12527 es_ES
dc.relation.projectID info:eu-repo/grantAgreement/JSPS//FY2019/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/UPV//PAID-01-18/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/UPV//PAID-10-18/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/UPV//PAID-01-16/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//GRISOLIA%2F2016%2F012/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/GVA//APOSTD%2F2018%2F014/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/MECD//FPU17%2F02389/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Producción Vegetal - Departament de Producció Vegetal es_ES
dc.contributor.affiliation Universitat Politècnica de València. Departamento de Biotecnología - Departament de Biotecnologia es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario de Conservación y Mejora de la Agrodiversidad Valenciana - Institut Universitari de Conservació i Millora de l'Agrodiversitat Valenciana es_ES
dc.description.bibliographicCitation Gramazio, P.; Lerma Lerma, MD.; Villanueva-Párraga, G.; Vilanova Navarro, S.; García-Fortea, E.; Mangino, G.; Figás-Moreno, MDR.... (2019). Detection, molecular characterisation and aspects involving the transmission of tomato chlorotic dwarf viroid in eggplant. Annals of Applied Biology. 175(2):172-183. https://doi.org/10.1111/aab.12527 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1111/aab.12527 es_ES
dc.description.upvformatpinicio 172 es_ES
dc.description.upvformatpfin 183 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 175 es_ES
dc.description.issue 2 es_ES
dc.relation.pasarela S\407110 es_ES
dc.contributor.funder Generalitat Valenciana es_ES
dc.contributor.funder Universitat Politècnica de València es_ES
dc.contributor.funder Japan Society for the Promotion of Science es_ES
dc.contributor.funder Ministerio de Educación, Cultura y Deporte es_ES
dc.description.references Bakker, D., Bruinsma, M., Dekter, R. W., Toonen, M. A. J., Verhoeven, J. T. J., & Koenraadt, H. M. S. (2015). Detection of PSTVd and TCDVd in seeds of tomato using real-time RT-PCR. EPPO Bulletin, 45(1), 14-21. doi:10.1111/epp.12195 es_ES
dc.description.references Barba, M., & James, D. (2017). Quarantine and Certification for Viroids and Viroid Diseases. Viroids and Satellites, 415-424. doi:10.1016/b978-0-12-801498-1.00039-5 es_ES
dc.description.references Broadbent, L. (1976). Epidemiology and Control of Tomato Mosaic Virus. Annual Review of Phytopathology, 14(1), 75-96. doi:10.1146/annurev.py.14.090176.000451 es_ES
dc.description.references Candresse, T., Marais, A., Tassus, X., Suhard, P., Renaudin, I., Leguay, A., … Blancard, D. (2010). First Report of Tomato chlorotic dwarf viroid in Tomato in France. Plant Disease, 94(5), 633-633. doi:10.1094/pdis-94-5-0633b es_ES
dc.description.references Candresse, T., Verhoeven, J. T. J., Stancanelli, G., Hammond, R. W., & Winter, S. (2017). Other Pospiviroids Infecting Solanaceous Plants. Viroids and Satellites, 159-168. doi:10.1016/b978-0-12-801498-1.00015-2 es_ES
dc.description.references Červená, G., Nečekalová, J., Mikulková, H., Levkaničová, Z., Mertelík, J., Kloudová, K., … Ptáček, J. (2011). VIROIDS ON PETUNIA AND OTHER SOLANACEOUS CROPS IN THE CZECH REPUBLIC. Acta Horticulturae, (901), 35-40. doi:10.17660/actahortic.2011.901.3 es_ES
dc.description.references Constable F. &Moran J.(1996).PCR protocols for the detection of chrysanthemum stunt and potato spindle tuber viroids. Final Report for the Horticultural Research and Development Corporation Project number PT410. Victoria Australia: Department of Natural Resources and Environment. es_ES
dc.description.references Daròs, J.-A. (2017). Eggplant Latent Viroid. Viroids and Satellites, 339-344. doi:10.1016/b978-0-12-801498-1.00032-2 es_ES
dc.description.references Di Serio, F., Flores, R., Verhoeven, J. T. J., Li, S.-F., Pallás, V., Randles, J. W., … Owens, R. A. (2014). Current status of viroid taxonomy. Archives of Virology, 159(12), 3467-3478. doi:10.1007/s00705-014-2200-6 es_ES
dc.description.references FAGOAGA, C., & DURAN-VILA, N. (1996). Naturally occurring variants of citrus exocortis viroid in vegetable crops. Plant Pathology, 45(1), 45-53. doi:10.1046/j.1365-3059.1996.d01-104.x es_ES
dc.description.references Flores, R., Hernández, C., Alba, A. E. M. de, Daròs, J.-A., & Serio, F. D. (2005). Viroids and Viroid-Host Interactions. Annual Review of Phytopathology, 43(1), 117-139. doi:10.1146/annurev.phyto.43.040204.140243 es_ES
dc.description.references Fox, A., Daly, M., Nixon, T., Brurberg, M. B., Blystad, D.-R., Harju, V., … Adams, I. P. (2013). First report ofTomato chlorotic dwarf viroid(TCDVd) in tomato in Norway and subsequent eradication. New Disease Reports, 27, 8. doi:10.5197/j.2044-0588.2013.027.008 es_ES
dc.description.references Giguère, T., Raj Adkar-Purushothama, C., & Perreault, J.-P. (2014). Comprehensive Secondary Structure Elucidation of Four Genera of the Family Pospiviroidae. PLoS ONE, 9(6), e98655. doi:10.1371/journal.pone.0098655 es_ES
dc.description.references Giguère, T., & Perreault, J.-P. (2017). Classification of the Pospiviroidae based on their structural hallmarks. PLOS ONE, 12(8), e0182536. doi:10.1371/journal.pone.0182536 es_ES
dc.description.references Gruber, A. R., Lorenz, R., Bernhart, S. H., Neubock, R., & Hofacker, I. L. (2008). The Vienna RNA Websuite. Nucleic Acids Research, 36(Web Server), W70-W74. doi:10.1093/nar/gkn188 es_ES
dc.description.references Hadidi, A., Flores, R., Randles, J., & Semancik, J. (2003). Viroids. doi:10.1071/9780643069855 es_ES
dc.description.references Hailstones, D. L., Tesoriero, L. A., Terras, M. A., & Dephoff, C. (2003). Detection and eradication of Potato spindle tuber viroid in tomatoes in commercial production in New South Wales, Australia. Australasian Plant Pathology, 32(2), 317. doi:10.1071/ap03005 es_ES
dc.description.references Hammond, R. W. (2017). Economic Significance of Viroids in Vegetable and Field Crops. Viroids and Satellites, 5-13. doi:10.1016/b978-0-12-801498-1.00001-2 es_ES
dc.description.references Hammond, R. W. (2017). Seed, Pollen, and Insect Transmission of Viroids. Viroids and Satellites, 521-530. doi:10.1016/b978-0-12-801498-1.00048-6 es_ES
dc.description.references Hirakawa, H., Shirasawa, K., Miyatake, K., Nunome, T., Negoro, S., Ohyama, A., … Fukuoka, H. (2014). Draft Genome Sequence of Eggplant (Solanum melongena L.): the Representative Solanum Species Indigenous to the Old World. DNA Research, 21(6), 649-660. doi:10.1093/dnares/dsu027 es_ES
dc.description.references James, T., Mulholland, V., Jeffries, C., & Chard, J. (2008). First report of Tomato chlorotic dwarf viroid infecting commercial petunia stocks in the United Kingdom. Plant Pathology, 57(2), 400-400. doi:10.1111/j.1365-3059.2007.01727.x es_ES
dc.description.references Keese, P., & Symons, R. H. (1985). Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution. Proceedings of the National Academy of Sciences, 82(14), 4582-4586. doi:10.1073/pnas.82.14.4582 es_ES
dc.description.references Kovalskaya, N., & Hammond, R. W. (2014). Molecular biology of viroid–host interactions and disease control strategies. Plant Science, 228, 48-60. doi:10.1016/j.plantsci.2014.05.006 es_ES
dc.description.references Kryczyński, S., Paduch-Cichal, E., & Skrzeczkowski, L. J. (1988). Transmission of Three Viroids Through Seed and Pollen of Tomato Plants. Journal of Phytopathology, 121(1), 51-57. doi:10.1111/j.1439-0434.1988.tb00952.x es_ES
dc.description.references Li, R., Baysal-Gurel, F., Abdo, Z., Miller, S. A., & Ling, K.-S. (2015). Evaluation of disinfectants to prevent mechanical transmission of viruses and a viroid in greenhouse tomato production. Virology Journal, 12(1), 5. doi:10.1186/s12985-014-0237-5 es_ES
dc.description.references Ling, K.-S. (2017). Decontamination Measures to Prevent Mechanical Transmission of Viroids. Viroids and Satellites, 437-445. doi:10.1016/b978-0-12-801498-1.00041-3 es_ES
dc.description.references Ling, K.-S., Verhoeven, J. T. J., Singh, R. P., & Brown, J. K. (2009). First Report of Tomato chlorotic dwarf viroid in Greenhouse Tomatoes in Arizona. Plant Disease, 93(10), 1075-1075. doi:10.1094/pdis-93-10-1075b es_ES
dc.description.references Ling, K.-S., & Zhang, W. (2009). First Report of a Natural Infection by Mexican Papita Viroid and Tomato Chlorotic Dwarf Viroid on Greenhouse Tomatoes in Mexico. Plant Disease, 93(11), 1216-1216. doi:10.1094/pdis-93-11-1216a es_ES
dc.description.references Mackie, A. E., Coutts, B. A., Barbetti, M. J., Rodoni, B. C., McKirdy, S. J., & Jones, R. A. C. (2015). Potato spindle tuber viroid: Stability on Common Surfaces and Inactivation With Disinfectants. Plant Disease, 99(6), 770-775. doi:10.1094/pdis-09-14-0929-re es_ES
dc.description.references Matsushita, Y., Kanda, A., Usugi, T., & Tsuda, S. (2008). First report of a Tomato chlorotic dwarf viroid disease on tomato plants in Japan. Journal of General Plant Pathology, 74(2), 182-184. doi:10.1007/s10327-008-0076-6 es_ES
dc.description.references Matsushita, Y., & Tsuda, S. (2014). Host ranges of Potato spindle tuber viroid, Tomato chlorotic dwarf viroid, Tomato apical stunt viroid, and Columnea latent viroid in horticultural plants. European Journal of Plant Pathology, 141(1), 193-197. doi:10.1007/s10658-014-0518-2 es_ES
dc.description.references Matsushita, Y., & Tsuda, S. (2016). Seed transmission of potato spindle tuber viroid, tomato chlorotic dwarf viroid, tomato apical stunt viroid, and Columnea latent viroid in horticultural plants. European Journal of Plant Pathology, 145(4), 1007-1011. doi:10.1007/s10658-016-0868-z es_ES
dc.description.references Matsushita, Y., Usugi, T., & Tsuda, S. (2009). Host range and properties of Tomato chlorotic dwarf viroid. European Journal of Plant Pathology, 124(2), 349-352. doi:10.1007/s10658-008-9416-9 es_ES
dc.description.references Matsushita, Y., Usugi, T., & Tsuda, S. (2011). Distribution of tomato chlorotic dwarf viroid in floral organs of tomato. European Journal of Plant Pathology, 130(4), 441-447. doi:10.1007/s10658-011-9766-6 es_ES
dc.description.references Matsuura, S., Matsushita, Y., Kozuka, R., Shimizu, S., & Tsuda, S. (2009). Transmission of Tomato chlorotic dwarf viroid by bumblebees (Bombus ignitus) in tomato plants. European Journal of Plant Pathology, 126(1), 111-115. doi:10.1007/s10658-009-9515-2 es_ES
dc.description.references Matsuura, S., Matsushita, Y., Usugi, T., & Tsuda, S. (2010). Disinfection of Tomato chlorotic dwarf viroid by chemical and biological agents. Crop Protection, 29(10), 1157-1161. doi:10.1016/j.cropro.2010.05.018 es_ES
dc.description.references Minoia, S., Navarro, B., Delgado, S., Serio, F. D., & Flores, R. (2015). Viroid RNA turnover: characterization of the subgenomic RNAs of potato spindle tuber viroid accumulating in infected tissues provides insights into decay pathways operating in vivo. Nucleic Acids Research, 43(4), 2313-2325. doi:10.1093/nar/gkv034 es_ES
dc.description.references Nie, X. (2012). Analysis of Sequence Polymorphism and Population Structure of Tomato chlorotic dwarf viroid and Potato spindle tuber viroid in Viroid-Infected Tomato Plants. Viruses, 4(6), 940-953. doi:10.3390/v4060940 es_ES
dc.description.references Palukaitis, P. (1987). Potato spindle tuber viroid: Investigation of the long-distance, intra-plant transport route. Virology, 158(1), 239-241. doi:10.1016/0042-6822(87)90260-1 es_ES
dc.description.references PROHENS, J., SOLER, S., & NUEZ, F. (1999). The effects of thermotherapy and sodium hypochlorite treatments on pepino seed germination, a crucial step in breeding programmes. Annals of Applied Biology, 134(3), 299-305. doi:10.1111/j.1744-7348.1999.tb05268.x es_ES
dc.description.references Shiraishi, T., Maejima, K., Komatsu, K., Hashimoto, M., Okano, Y., Kitazawa, Y., … Namba, S. (2013). First report of tomato chlorotic dwarf viroid isolated from symptomless petunia plants (Petunia spp.) in Japan. Journal of General Plant Pathology, 79(3), 214-216. doi:10.1007/s10327-013-0444-8 es_ES
dc.description.references Sievers, F., Wilm, A., Dineen, D., Gibson, T. J., Karplus, K., Li, W., … Higgins, D. G. (2011). Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega. Molecular Systems Biology, 7(1), 539. doi:10.1038/msb.2011.75 es_ES
dc.description.references Singh, R. P. (1992). Detection of Potato Spindle Tuber Viroid in the Pollen and Various Parts of Potato Plant Pollinated with Viroid-Infected Pollen. Plant Disease, 76(9), 951. doi:10.1094/pd-76-0951 es_ES
dc.description.references Singh, R. P., Nie, X., & Singh, M. (1999). Tomato chlorotic dwarf viroid: an evolutionary link in the origin of pospiviroids The GenBank accession number of the sequence reported in this paper is AF162131. Journal of General Virology, 80(11), 2823-2828. doi:10.1099/0022-1317-80-11-2823 es_ES
dc.description.references Singh, R. P., & Dilworth, A. D. (2008). Tomato chlorotic dwarf viroid in the ornamental plant Vinca minor and its transmission through tomato seed. European Journal of Plant Pathology, 123(1), 111-116. doi:10.1007/s10658-008-9344-8 es_ES
dc.description.references Singh, R. P., Dilworth, A. D., Ao, X., Singh, M., & Misra, S. (2009). Molecular and biological characterization of a severe isolate of Tomato chlorotic dwarf viroid containing a novel terminal right (TR) domain sequence. European Journal of Plant Pathology, 127(1), 63-72. doi:10.1007/s10658-009-9571-7 es_ES
dc.description.references Škorić, D. (2017). Viroid Biology. Viroids and Satellites, 53-61. doi:10.1016/b978-0-12-801498-1.00005-x es_ES
dc.description.references Van Bogaert, N., Smagghe, G., Maes, M., De Backer, M., & De Jonghe, K. (2017). Phylogeny of five predominant pospiviroid species in Belgium. European Journal of Plant Pathology, 149(1), 25-33. doi:10.1007/s10658-017-1158-0 es_ES
dc.description.references Verhoeven, J. T. J., Jansen, C. C. C., Botermans, M., & Roenhorst, J. W. (2010). Epidemiological evidence that vegetatively propagated, solanaceous plant species act as sources ofPotato spindle tuber viroidinoculum for tomato. Plant Pathology, 59(1), 3-12. doi:10.1111/j.1365-3059.2009.02173.x es_ES
dc.description.references Verhoeven, J. T. J., Hammond, R. W., & Stancanelli, G. (2017). Economic Significance of Viroids in Ornamental Crops. Viroids and Satellites, 27-38. doi:10.1016/b978-0-12-801498-1.00003-6 es_ES
dc.description.references Verhoeven, J. th. j., Jansen, C. C. C., Willemen, T. M., Kox, L. F. F., Owens, R. A., & Roenhorst, J. W. (2004). Natural infections of tomato by Citrus exocortis viroid, Columnea latent viroid, Potato spindle tuber viroid and Tomato chlorotic dwarf viroid. European Journal of Plant Pathology, 110(8), 823-831. doi:10.1007/s10658-004-2493-5 es_ES
dc.description.references Võ, T. T., Dehne, H.-W., & Hamacher, J. (2018). Transmission of Tomato chlorotic dwarf viroid by Myzus persicae assisted by Potato leafroll virus. Journal of Plant Diseases and Protection, 125(3), 259-266. doi:10.1007/s41348-018-0151-y es_ES
dc.description.references Wassenegger, M., Spieker, R. L., Thalmeir, S., Gast, F.-U., Riedel, L., & Sänger, H. L. (1996). A Single Nucleotide Substitution Converts Potato Spindle Tuber Viroid (PSTVd) from a Noninfectious to an Infectious RNA for Nicotiana tabacum. Virology, 226(2), 191-197. doi:10.1006/viro.1996.0646 es_ES
dc.description.references Yanagisawa, H., & Matsushita, Y. (2018). Differences in dynamics of horizontal transmission of Tomato planta macho viroid and Potato spindle tuber viroid after pollination with viroid-infected pollen. Virology, 516, 258-264. doi:10.1016/j.virol.2018.01.023 es_ES
dc.description.references Yanagisawa, H., Sano, T., Hase, S., & Matsushita, Y. (2019). Influence of the terminal left domain on horizontal and vertical transmissions of tomato planta macho viroid and potato spindle tuber viroid through pollen. Virology, 526, 22-31. doi:10.1016/j.virol.2018.09.021 es_ES


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