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Identification and genomic characterization of a novel tobamovirus from prickly pear cactus

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Identification and genomic characterization of a novel tobamovirus from prickly pear cactus

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dc.contributor.author Salgado-Ortiz, Héctor es_ES
dc.contributor.author De La Torre-Almaraz, Rodolfo es_ES
dc.contributor.author SANCHEZ NAVARRO, JESUS ANGEL es_ES
dc.contributor.author Pallás Benet, Vicente es_ES
dc.date.accessioned 2021-05-08T03:31:34Z
dc.date.available 2021-05-08T03:31:34Z
dc.date.issued 2020-03 es_ES
dc.identifier.issn 0304-8608 es_ES
dc.identifier.uri http://hdl.handle.net/10251/166083
dc.description.abstract [EN] In this work, we describe the complete sequence and genome organization of a novel tobamovirus detected in a prickly pear plant (Opuntia sp.) by high-throughput sequencing, tentatively named "opuntia virus 2". The full genome of opuntia virus 2 is 6,453 nucleotides in length and contains four open reading frames (ORFs) coding for the two subunits of the RNA polymerase, the movement protein, and the coat protein, respectively. Phylogenetic analysis using the complete nucleotide sequence revealed that the virus belongs to the genus Tobamovirus (family Virgaviridae), showing the highest nucleotide sequence identity (49.8%) with cactus mild mottle virus (CMMoV), being indicating that it belongs in the Cactaceae subgroup of tobamoviruses. es_ES
dc.description.sponsorship This study was funded by project no. IN216317 of UNAM-Programa de Apoyo a Proyectos de Investigacion e Innovacion Tecnologica (PAPIIT) and by Grant BIO2017-88321-R from the Spanish Agencia Estatal de Investigacion (AEI) and Fondo Europeo de Desarrollo Regional (FEDER). es_ES
dc.language Inglés es_ES
dc.publisher Springer-Verlag es_ES
dc.relation.ispartof Archives of Virology es_ES
dc.rights Reserva de todos los derechos es_ES
dc.title Identification and genomic characterization of a novel tobamovirus from prickly pear cactus es_ES
dc.type Artículo es_ES
dc.identifier.doi 10.1007/s00705-020-04528-3 es_ES
dc.relation.projectID info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/BIO2017-88321-R/ES/DESCRIFRANDO INTERACCIONES VIRUS-PLANTA ESENCIALES PARA LA SUSCEPTIBILIDAD Y%2FO RESISTENCIA EN DOS PATOSISTEMAS AGRONOMICAMENTE RELEVANTES/ es_ES
dc.relation.projectID info:eu-repo/grantAgreement/UNAM//IN216317/ es_ES
dc.rights.accessRights Abierto es_ES
dc.contributor.affiliation Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes es_ES
dc.description.bibliographicCitation Salgado-Ortiz, H.; De La Torre-Almaraz, R.; Sanchez Navarro, JA.; Pallás Benet, V. (2020). Identification and genomic characterization of a novel tobamovirus from prickly pear cactus. Archives of Virology. 165(3):781-784. https://doi.org/10.1007/s00705-020-04528-3 es_ES
dc.description.accrualMethod S es_ES
dc.relation.publisherversion https://doi.org/10.1007/s00705-020-04528-3 es_ES
dc.description.upvformatpinicio 781 es_ES
dc.description.upvformatpfin 784 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion es_ES
dc.description.volume 165 es_ES
dc.description.issue 3 es_ES
dc.identifier.pmid 31980940 es_ES
dc.relation.pasarela S\433226 es_ES
dc.contributor.funder Agencia Estatal de Investigación es_ES
dc.contributor.funder European Regional Development Fund es_ES
dc.contributor.funder Universidad Nacional Autónoma de México es_ES
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