Simultaneous online monitoring of viscosity and oxygen transfer rate in shake flask cultures

dc.contributor.affiliationInstituto Universitario Mixto de Tecnología Química
dc.contributor.authorHanke, Renées_ES
dc.contributor.authorSieben, Michaelaes_ES
dc.contributor.authorFinger, Mauricees_ES
dc.contributor.authorSchnoor, Kilianes_ES
dc.contributor.authorJessberger, Simones_ES
dc.contributor.authorWeyand, Juliaes_ES
dc.contributor.authorColoma de la-Fuente, Lluís
dc.contributor.authorMann, Marceles_ES
dc.contributor.authorAzizan, Amizones_ES
dc.contributor.authorKosfeld, Udoes_ES
dc.contributor.authorBüchs, Jochenes_ES
dc.contributor.funderProjekt DEALes_ES
dc.date.accessioned2026-07-22T11:15:26Z
dc.date.available2026-07-22T11:15:26Z
dc.date.issued2025-08-22es_ES
dc.description.abstract[EN] Shake flasks are among the most relevant culture vessels for early-stage process development of viscous microbial cultures. While online process monitoring systems are available for temperature, pH, biomass concentration, dissolved oxygen tension and respiration activity, online measuring techniques for viscosity are not yet commercially available. Especially during the production of biopolymers and the cultivation of filamentous fungi or bacteria, quantification of fermentation broth viscosity is essential to ensure adequate mixing as well as gas/ liquid mass and heat transfer. In this work, a previously developed quantitative online viscosity measurement technique, termed ViMOS, is refined to monitor the apparent viscosity of up to eight shake flask cultures in parallel. In addition, the necessary preparation to ensure reproducible measurements is elucidated. By cultivating the two exopolysaccharide forming bacterial strains, Paenibacillus polymyxa and Xanthomonas campestris, as well as the filamentous fungus Trichoderma reesei, the ViMOS was successfully validated for viscosity values up to 120 mPa·s. The combination with oxygen transfer rate monitoring via a RAMOS device allowed to detect microbial growth phases, oxygen limitations, biopolymer production and degradation, as well as the morphological development of filamentous cultures. This dual online monitoring has the potential to improve screening conditions and simplify scale-up procedures of small-scale bioprocesseses_ES
dc.description.accrualMethodSes_ES
dc.description.bibliographicCitationHanke, R.; Sieben, M.; Finger, M.; Schnoor, K.; Jessberger, S.; Weyand, J.; Coloma de la-Fuente, Lluís... (2025). Simultaneous online monitoring of viscosity and oxygen transfer rate in shake flask cultures. Journal of Biological Engineering. 19(1). https://doi.org/10.1186/s13036-025-00552-6es_ES
dc.description.issue1es_ES
dc.description.sponsorshipOpen Access funding enabled and organized by Projekt DEAL. This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.es_ES
dc.description.volume19es_ES
dc.identifier.doi10.1186/s13036-025-00552-6es_ES
dc.identifier.eissn1754-1611es_ES
dc.identifier.issn2196-9736es_ES
dc.identifier.pmcidPMC12374283es_ES
dc.identifier.pmid40847312es_ES
dc.identifier.urihttps://riunet.upv.es/handle/10251/238061
dc.languageIngléses_ES
dc.publisherBioMed Centrales_ES
dc.relation.ispartofJournal of Biological Engineeringes_ES
dc.relation.pasarelaS\589325es_ES
dc.relation.publisherversionhttps://doi.org/10.1186/s13036-025-00552-6es_ES
dc.rightsReconocimiento (by)es_ES
dc.rights.accessRightsAbiertoes_ES
dc.subjectBioprocesses_ES
dc.subjectOptical measurementes_ES
dc.subjectPaenibacillus polymyxaes_ES
dc.subjectProcess analytical technology (PAT)es_ES
dc.subjectRespiratory activity monitoring system (RAMOS)es_ES
dc.subjectRheologyes_ES
dc.subjectTrichoderma reeseies_ES
dc.subjectViscosity monitoring online system (ViMOS)es_ES
dc.subjectXanthomonas campestrises_ES
dc.titleSimultaneous online monitoring of viscosity and oxygen transfer rate in shake flask cultureses_ES
dc.typeArtículoes_ES
dc.type.versioninfo:eu-repo/semantics/publishedVersiones_ES
dspace.entity.typePublication
person.identifier529297
relation.isAuthorOfPublication4aa3c078-7f24-45f1-8ce4-11919e695276
relation.isAuthorOfPublication.latestForDiscovery4aa3c078-7f24-45f1-8ce4-11919e695276
relation.isOrgUnitOfPublicationb97c2806-5147-442a-a1a8-a2c75cc2a941
relation.isOrgUnitOfPublication.latestForDiscoveryb97c2806-5147-442a-a1a8-a2c75cc2a941
upv.uuide1a56d23-0f1e-490a-bf6d-2ea136d4f152es_ES

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