- -

Simultaneous detection of Clavibacter michiganensis subsp michiganensis, Pepino mosaic virus and Mexican papita viroid by non-radioactive molecular hybridization using a unique polyprobe

RiuNet: Repositorio Institucional de la Universidad Politécnica de Valencia

Compartir/Enviar a

Citas

Estadísticas

  • Estadisticas de Uso

Simultaneous detection of Clavibacter michiganensis subsp michiganensis, Pepino mosaic virus and Mexican papita viroid by non-radioactive molecular hybridization using a unique polyprobe

Mostrar el registro completo del ítem

Zamora-Macorra, E.; Ochoa-Martinez, D.; Valdovinos-Ponce, G.; Rojas-Martinez, R.; Ramirez-Rojas, S.; Sanchez Navarro, JA.; Pallás Benet, V.... (2015). Simultaneous detection of Clavibacter michiganensis subsp michiganensis, Pepino mosaic virus and Mexican papita viroid by non-radioactive molecular hybridization using a unique polyprobe. European Journal of Plant Pathology. 143(4):779-787. doi:10.1007/s10658-015-0729-1

Por favor, use este identificador para citar o enlazar este ítem: http://hdl.handle.net/10251/70552

Ficheros en el ítem

[Cerrado]
Nombre: Zamora-Macorra;Oc ...
Tamaño: 1.434Mb
Formato: PDF
Descripción: Versión editorial
Solicitar una copia al autor

Metadatos del ítem

Título: Simultaneous detection of Clavibacter michiganensis subsp michiganensis, Pepino mosaic virus and Mexican papita viroid by non-radioactive molecular hybridization using a unique polyprobe
Autor: Zamora-Macorra, E Ochoa-Martinez, DL Valdovinos-Ponce, G Rojas-Martinez, R Ramirez-Rojas, S Sanchez Navarro, Jesus Angel Pallás Benet, Vicente Aparicio Herrero, Frederic
Entidad UPV: Universitat Politècnica de València. Departamento de Biotecnología - Departament de Biotecnologia
Universitat Politècnica de València. Instituto Universitario Mixto de Biología Molecular y Celular de Plantas - Institut Universitari Mixt de Biologia Molecular i Cel·lular de Plantes
Fecha difusión:
Resumen:
Clavibacter michiganensis subsp. michiganensis, Pepino mosaic virus, and Mexican papita viroid are three economically important pathogens that infect tomato crops. In this work, a polyprobe (poly-3) was developed and ...[+]
Palabras clave: Tomato , Clavibacter michiganensis subsp michiganensis , Pepino mosaic , Virus , Mexican papita viroid , Polyriboprobe , Non-isotopic molecular hybridization
Derechos de uso: Cerrado
Fuente:
European Journal of Plant Pathology. (issn: 0929-1873 )
DOI: 10.1007/s10658-015-0729-1
Editorial:
Springer Verlag (Germany)
Versión del editor: http://dx.doi.org/10.1007/s10658-015-0729-1
Código del Proyecto:
info:eu-repo/grantAgreement/MINECO//BIO2014-54862-R/ES/INTERACCIONES ENTRE FACTORES VIRALES Y DEL HUESPED IMPLICADOS EN LOS PROCESOS DE MOVIMIENTO Y PATOGENESIS EN CULTIVOS DE INTERES AGRONOMICO/ /
info:eu-repo/grantAgreement/MICINN//RYC-2010-06169/ES/RYC-2010-06169/
info:eu-repo/grantAgreement/MICINN//GV%2F2011%2F003/ES/GV%2F2011%2F003/
info:eu-repo/grantAgreement/UPV//PAID-06-10-1496/ES/PAID-06-10-1496/
Agradecimientos:
E.J M-Z. was recipient of a Pre-doctoral fellowship from the Consejo Nacional de Ciencia y Tecnologia of Mexico. F.A. was recipient of a contract Ramon y Cajal (RYC-2010-06169) Program of the Ministerio de Educacion y ...[+]
Tipo: Artículo

References

Anonymous. Council Directive 2000/29/EC of 8 May 2000 on protective measures against the introduction into the Community of organisms harmful to plants or plant products and against their spread within the Community. Office for Official Publications of the European Communities. Consolidated Text, pages 1–159. http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2000:169:0001:0112

Aparicio, F., Soler, S., Aramburu, J., Galipienso, L., Nuez, F., Pallás, V., & López, C. (2009). Simultaneous detection of six RNA plant viruses affecting tomato crops using a single digoxigenin-labelled polyprobe. European Journal of Plant Pathology, 123, 117–123.

Astruc, N., Marcos, J. F., Macquaire, G., Candresse, T., & Pallás, V. (1996). Studies on the diagnosis of hop stunt viroid in fruit trees: identification of new hosts and application of a nucleic acid extraction procedure based on non-organic solvents. European Journal of Plant Pathology, 102, 837–846. [+]
Anonymous. Council Directive 2000/29/EC of 8 May 2000 on protective measures against the introduction into the Community of organisms harmful to plants or plant products and against their spread within the Community. Office for Official Publications of the European Communities. Consolidated Text, pages 1–159. http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2000:169:0001:0112

Aparicio, F., Soler, S., Aramburu, J., Galipienso, L., Nuez, F., Pallás, V., & López, C. (2009). Simultaneous detection of six RNA plant viruses affecting tomato crops using a single digoxigenin-labelled polyprobe. European Journal of Plant Pathology, 123, 117–123.

Astruc, N., Marcos, J. F., Macquaire, G., Candresse, T., & Pallás, V. (1996). Studies on the diagnosis of hop stunt viroid in fruit trees: identification of new hosts and application of a nucleic acid extraction procedure based on non-organic solvents. European Journal of Plant Pathology, 102, 837–846.

Bach, H. J., Jessen, I., Schloter, M., & Munch, J. C. (2003). A TaqMan-PCR protocol for quantification and differentiation of the phytopathogenic Clavibacter michiganensis subspecies. Journal Microbiological Methods, 52, 85–89.

Chalupowicz, L., Cohen-Kandli, M., Dror, O., Eichenlaub, R., Gartemann, K.-H., Sessa, G., Barash, I., & Manulis-Sasson, S. (2010). Sequential expression of bacterial virulence and plant defense genes during infection of tomato with Clavibacter michiganensis subsp. michiganensis. Phytopathology, 100, 252–261.

Cohen, O., Batuman, O., Stanbekova, G., Sano, T., Mawassi, M., & Bar-Joseph, M. (2006). Construction of a multiprobe for the simultaneous detection of viroids infecting citrus trees. Virus Genes, 33, 287–292.

Córdoba-Sellės, M. C., Garcîa-Rández, A., Alfaro-Fernández, A., & Jordó-Gutiérrez, C. (2007). Seed transmission of Pepino mosaic virus and efficacy of tomato seed disinfection treatments. Plant Disease, 91, 1250–1254.

De León, L., Rodríguez, A., López, M. M., & Siverio, F. (2008). Evaluation of the efficacy of immunomagnetic separation for the detection of Clavibacter michiganensis subsp. michiganensis in tomato seeds. Journal Applied Microbiology, 104, 776–786.

De León, L., Siverio, F., López, M. M., & Rodríguez, A. (2011). Clavibacter mchiganensis subsp. michiganensis, a seedborne tomato pathogen: healthy seed are still the goal. Plant Disease, 95, 1328–1338.

Dessaux, Y., Elasri, M., Glickmann, E., Oger, P., Petit, A., & Vaudequin-Dransart, V. (1995). The use of digoxigenin-labelled probes to detect DNA sequences specific for plant pathogenic bacteria. Cellular and Molecular Biology, 41, 933–943.

Di Serio, F., Flores, R., Verhoeven, J. T. J., Li, S.-F., Pallás, V., Randles, J. W., Sano, T., Vidalakis, G., & Owens, R. A. (2014). Current status of viroid taxonomy. Archives of Virology, 159, 3467–3478.

Dreier, J., Bermpohl, A., & Eichenlaub, R. (1995). Southern hybridization and PCR for specific detection of phytopathogenic Clavibacter michiganensis subsp. michiganensis. Phytopathology, 85, 462–468.

Fajardo, T. V. M., & Nickel, O. (2014). Simultaneous detection of four viruses affecting apple and pear by molecular hybridization using a polyprobe. Ciencia Rural, 44, 1711–1714.

Fanelli, V., Cariddi, C., & Finetti-Sialer, M. (2007). Selective detection of Pseudomonas syringae pv. Tomato using dot blot hybridization and real-time PCR. Plant Pathology, 56, 683–691.

Herranz, M. C., Sanchez-Navarro, J. A., Aparicio, F., & Pallás, V. (2005). Simultaneous detection of six stone fruit viruses by non-isotopic molecular hybridization using a unique riboprobe or ‘polyprobe’. Journal of Virological Methods, 124, 49–55.

Ivars, P., Alonso, M., Borja, M., & Hernandez, C. (2004). Development of a non-radioactive dot-blot hybridisation assay for the detection of Pelargonium flower break virus and Pelargonium line pattern virus. Eurpean Journal of Plant Patholology, 110, 275–283.

James, D., Varga, A., Pallas, V., & Candresse, T. (2010). Strategies for simultaneous detection of multiple plant viruses. Canadian Journal of Plant Pathology, 28, 16–29.

Johnson, K. L., & Walcott, R. R. (2012). Progress towards a real-time PCR assay for the simultaneous detection of Clavibacter michiganensis subsp. michiganensis and Pepino mosaic virus in tomato seed. Journal of Phytopathology, 160, 353–363.

Jones, R. A. C., Koenig, R., & Lesemann, D. E. (1980). Pepino mosaic virus, a new potexvirus from pepino (Solanum muricatum). Annals of Applied Biology, 94, 61–68.

Jorda, C., Pérez, A. L., Martıínez-Culebras, P., & Lacasa, A. (2001). First report of Pepino mosaic virus on natural hosts. Plant Disease, 85, 1292.

Kokosková, B., Mráz, I., & Fousek, J. (2010). Comparison of specificity and sensitivity of immunochemical and molecular techniques for determination of Clavibacter michiganensis subsp. michiganensis. Folia Microbiology, 55, 239–244.

Lin, L., Li, R., Mock, R., & Kinard, G. (2011). Development of a polyprobe to detect six viroids of pome and stone fruit trees. Journal of Virological Methods, 171, 91–97.

Ling, K. S. (2008). Pepino mosaic virus on tomato seed: virus location and mechanical transmission. Plant Disease, 92, 1701–1705.

Ling, K. & Carpenter, L. (2005). Pepino mosaic virus, an emerging disease in tomato greenhouse production worldwide; is seed responsible? Proc 1 sr IC on tomato diseases. In M.T. Momal, P. Ji and J.B. Jones (Eds.), Acta Horticultura 695.

Ling, K.-S., & Zhang, W. (2009). First report of a natural infection by Mexican Papita Viroid and Tomato Chlorotic Dwarf Viroid on greenhouse tomatoes in Mexico. Plant Disease, 93, 1216.

Luo, L. X., Walters, C., Bolkan, H., Liu, X. L., & Li, J. Q. (2008). Quantification of viable cells of Clavibacter michiganensis subsp. Michiganensis using a DNA binding dye and a real-time PCR assay. Plant Pathology, 57, 332–337.

Meletzus, D., Bermpohl, A., Dreier, J., & Eichenlaub, R. (1993). Evidence for plasmid-encoded virulence factors in the phytopathogenic bacterium Clavibacter michiganensis subsp. michiganensis NCPPB382. Journal of Bacteriology, 175, 2131–2136.

Minutillo, S. A., Mascia, T., & Gallitelli, D. (2012). A DNA probe mix for the multiplex detection of ten artichoke viruses. European Journal of Plant Pathology, 134, 459–465.

OEPP/EPPO. (2005). EPPO Standards PM 7/42 (1) diagnostic. Clavibacter michiganensis subsp. michiganensis. Bulletin OEPP-EPPO Bulletin, 35, 275–283.

Olivier, V., Baloche, A., Drouin, A., Audusseau, C., Paillard, S., & Soubelet, H. (2010). Internal methods comparison study and inter-laboratory study on Clavibacter michiganensis subsp. michiganensis in tomato seeds. Bulletin OEPP/EPPO Bulletin, 40, 248–256.

Özdemir, Z. (2009). Development of a multiplex PCR assay for the simultaneous detection of Clavibacter michiganensis subsp. michiganensis, Pseudomonas syringae pv. tomato and Xanthomonas axonopodis pv. Vesicatoria using pure cultures. Jouranl of Plant Pathology, 91, 495–497.

Pallás, V., Mas, P., & Sánchez-Navarro, J. A. (1998). Detection of plant RNA viruses by nonisotopic dot-blot hybridization. Methods in Molecular Biology, 81, 461–468.

Pallas, V., Sanchez-Navarro, J. A., Varga, F., Aparicio, F., & James, D. (2009). Multiplex Polymerase Chain Reaction (PCR) and Real-time Multiplex PCR for the simultaneous detection of plant viruses. Methods in Molecular Biology, 508, 193–208.

Peiró, A., Pallás, V., & Sánchez-Navarro, J. A. (2012). Simultaneous detection of eight viruses and two viroids affecting stone fruit trees by using a unique polyprobe. European Journal of Plant Pathology, 132, 469–475.

Saade, M., Aparicio, F., Sanchez-Navarro, J. A., Herranz, M. C., Myrta, A., Di-Terlizzi, B., & Pallás, V. (2000). Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridisation and multiplex reverse-transcription polymerase chain reaction. Phytopathology, 90, 1330–1336.

Saldarelli, P., Barbarossa, L., Grieco, F., & Gallitelli, D. (1996). Digoxigenin-labelled riboprobes applied to phytosanitary certification of tomato in Italy. Plant Disease, 80, 1343–1346.

Sanchez-Navarro, J. A., Aparicio, F., Rowhani, A., & Pallás, V. (1998). Comparative analysis of ELISA, nonradioactive molecular hybridization and PCR for the detection of prunus necrotic ringspot virus in herbaceous and Prunus hosts. Plant Pathology, 47, 780–786.

Sanchez-Navarro, J. A., Cañizares, M. C., Cano, E. A., & Pallás, V. (1999). Simultaneous detection of five carnation viruses by non-isotopic molecular hybridization. Journal of Virological Methods, 82, 167–175.

Spence, N. J., Basham, J., Mumford, R. A., Hayman, G., Edmondson, R., & Jones, D. R. (2006). Effect of Pepino mosaic virus on the yield and quality of glasshouse-grown tomatoes in the UK. Plant Pathology, 55, 595–606.

Thompson, J. R., Wetzel, S., Klerks, M. M., Vaskova, D., Schoen, C. D., Spak, J., et al. (2003). Multiplex RT-PCR detection of four aphid-borne strawberry viruses in Fragaria spp. in combination with a plant mRNA specific internal control. Journal of Virological Methods, 111, 85–93.

Torchetti, E. M., Navarro, B., & Di Serio, F. (2012). A single polyprobe for detecting simultaneously eight pospiviroids infecting ornamentals and vegetables. Journal of Virological Methods, 186, 141–146.

Verhoeven, J. ThJ., Roenhorst, J. W., & Owens, R. A. (2011). Mexican papita viroid and Tomato planta macho viroid belong to a sing le species in the genus Pospiviroid. Archives of Virology, 156, 1433–1437.

Zhang, Z., Peng, S., Dongmei, J., Pan, S., Wang, H., & Li, S. (2012). Development of a polyprobe for the simultaneous detection of four grapevine viroids in grapevine plants. European Journal of Plant Pathology, 132, 9–16.

Zhao, W. J., Chen, H. Y., Zhu, S. F., Xia, M. X., & Tan, T. W. (2007). One step detection of Clavibacter michiganensis subsp. michiganensis in symptomless tomato seeds using a TaqMan probe. Jouranl of Plant Pathology, 89, 349–351.

[-]

recommendations

 

Este ítem aparece en la(s) siguiente(s) colección(ones)

Mostrar el registro completo del ítem