Abascal F, Zardoya R, Posada D (2005) ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104–2105
Asteri I-A, Boutou E, Anastasiou R, Pot B, Vorgias CE, Tsakalidou E, Papadimitriou K (2011) In silico evidence for the horizontal transfer of gsiB, a σB-regulated gene in gram-positive bacteria to lactic acid bacteria. Appl Environ Microbiol 77:3526–3531
Battaglia M, Olvera-Carrillo Y, Garciarrubio A, Campos F, Covarrubias AA (2008) The enigmatic LEA proteins and other hydrophilins. Plant Physiol 148:6–24
[+]
Abascal F, Zardoya R, Posada D (2005) ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104–2105
Asteri I-A, Boutou E, Anastasiou R, Pot B, Vorgias CE, Tsakalidou E, Papadimitriou K (2011) In silico evidence for the horizontal transfer of gsiB, a σB-regulated gene in gram-positive bacteria to lactic acid bacteria. Appl Environ Microbiol 77:3526–3531
Battaglia M, Olvera-Carrillo Y, Garciarrubio A, Campos F, Covarrubias AA (2008) The enigmatic LEA proteins and other hydrophilins. Plant Physiol 148:6–24
Bensmihen S, To A, Lambert G, Kroj T, Giraudat J, Parcy F (2004) Analysis of an activated ABI5 allele using a new selection method for transgenic Arabidopsis seeds. FEBS Lett 561:127–131
Brandon M, Hall BM, Owns KM, Singh KK (2011) Distinct functions of evolutionary conserved MSF1 and late embryogenesis abundant (LEA)-like domains in mitochondria. J Biol Chem 286:39141–39152
Browne J, Tunnacliffe A, Burnell A (2002) Anhydrobiosis: plant desiccation gene found in a nematode. Nature 416:38
Campos F, Zamudio F, Covarrubias AA (2006) Two different late embryogenesis abundant proteins from Arabidopsis thaliana contain specific domains that inhibit Escherichia coli growth. Biochem Biophys Res Commun 342:406–413
Campos F, Guillen G, Reyes JL, Covarrubias AA (2011) A general method of protein purification for recombinant unstructured non-acidic proteins. Protein Expr Purif 80:47–51
Chen WH, Ge X, Wang W, Yu J, Hu S (2009) A gene catalogue for post-diapause development of an anhydrobiotic arthropod Artemia franciscana. BMC Genomics 10:52
Crooks GE, Hon G, Chandonia JM, Brenner SE (2004) WebLogo: a sequence logo generator. Genome Res 14:1188–1190
Del Bem LE, Vincentz MGA (2010) Evolution of xyloglucan-related genes in green plants. BMC Evol Biol 10:341
Delseny M, Bies-Etheve N, Carles C, Hull G, Vicient C, Raynal M, Grellet F, Aspart L (2001) Late embryogenesis abundant (LEA) protein gene regulation during Arabidopsis seed maturation. J Plant Physiol 158:419–427
Dunning-Hotopp J et al (2007) Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes. Science 317:1753–1756
Dure L, Galau GA (1981) Developmental biochemistry of cotton seed embryogenesis and germination. XIII. Regulation of biosynthesis of principal storage proteins. Plant Physiol 68:187–194
Erkel C, Kube M, Reinhardt R, Liesack W (2006) Genome of rice cluster I Archaea-the key methane producers in the rice rhizosphere. Science 313:370–372
Espelund M, Saebøe-Larssen S, Hughes DW, Galau GA, Larsen F, Jakobsen KS (1992) Late embryogenesis-abundant genes encoding proteins with different numbers of hydrophilic repeats are regulated differentially by abscisic acid and osmotic stress. Plant J 2:241–252
Garay-Arroyo A, Colmenero-Flores JM, Garciarrubio A, Covarrubias AA (2000) Highly hydrophilic proteins in prokaryotes and eukaryotes are common during conditions of water deficit. J Biol Chem 275:5668–5674
Gaubier P, Raynal M, Hull G, Huestis GM, Grellet F, Arenas C, Pagès M, Delseny M (1993) Two different Em-like genes are expressed in Arabidopsis thaliana seeds during maturation. Mol Gen Genet 238:409–418
Gilles GJ, Hines KM, Manfre AJ, Marcotte WR Jr (2007) A predicted N-terminal helical domain of a group 1 LEA protein is required for protection of enzyme activity from drying. Plant Physiol Biochem 45:389–399
Goyal K, Walton LJ, Tunnacliffe A (2005) LEA proteins prevent protein aggregation due to water stress. Biochem J 388:151–157
Graham LE, Arancibia-Avila P, Taylor WA, Strother PK, Cook ME (2012) Aeroterrestrial Coleochaete (Streptophyta, Coleochaetales) models early plant adaptation to land. Am J Bot 99:130–144
Hand SC, Jones D, Menze MA, Witt TL (2007) Life without water: expression of plant LEA genes by an anhydrobiotic arthropod. J Exp Zool 307:62–66
Hand SC, Menze MA, Toner M, Boswell L, Moore D (2010) LEA proteins during water stress: not just for plants anymore. Annu Rev Physiol 73:115–134
Hara M, Fujinaga M, Kuboi T (2004) Radical scavenging activity and oxidative modification of citrus dehydrin. Plant Physiol Biochem 42:657–662
Hattori T, Terada T, Hamasuna S (1995) Regulation of the Osem gene by abscisic acid and the transcriptional activator VP1: analysis of cis-acting promoter elements required for regulation by abscisic acid and VP1. Plant J 7:913–925
Higuchi R (1990) Recombinant PCR. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 177–183
Hoekstra FA, Golosina EA, Buitink J (2001) Mechanisms of plant desiccation tolerance. Trends Plant Sci 6:431–438
Hundertmark M, Popova AV, Rausch S, Seckler R, Hincha DK (2012) Influence of drying on the secondary structure of intrinsically disordered and globular proteins. Biochem Biophys Res Commun 417:122–128
Huntley S, Hamann N, Wegener-Feldbrügge S, Treuner-Lange A, Kube M, Reinhardt R, Klages S, Müller R, Ronning CM, Nierman WC, Søgaard-Andersen L (2011) Comparative genomic analysis of fruiting body formation in Myxococcales. Mol Biol Evol 28:1083–1097
Imai R, Chang L, Ohta A, Bray EA, Takagi M (1996) A lea-class gene of tomato confers salt and freezing tolerance when expressed in Saccharomyces cerevisiae. Gene 170:243–248
Ingram J, Bartels D (1996) The molecular basis of dehydration tolerance in plants. Annu Rev Plant Physiol Plant Mol Biol 47:377–403
Kikawada T, Nakahara Y, Kanamori Y, Iwata K-I, Watanabe M, McGee B, Tunnacliffe A, Okuda T (2006) Dehydration-induced expression of LEA proteins in an anhydrobiotic chironomid. Biochem Biophys Res Commun 348:56–61
Le SQ, Gascuel O (2008) An improved general amino acid replacement matrix. Mol Biol Evol 25:1307–1320
Lee K, Ebbole DJ (1998) Analysis of two transcription activation elements in the promoter of the developmentally regulated con-10 gene of Neurospora crassa. Fungal Genet Biol 23:259–268
Liu Y, Zheng Y (2005) PM2, a group 3 LEA protein from soybean, and its 22-mer repeating region confer salt tolerance in Escherichia coli. Biochem Biophys Res Commun 331:325–332
Manfre AJ, Lanni LM, Marcotte WR Jr (2006) The Arabidopsis group 1 LATE EMBRYOGENESIS ABUNDANT protein ATEM6 is required for normal seed development. Plant Physiol 140:140–149
Manfre AJ, LaHatte GA, Climer CR, Marcotte WR Jr (2009) Seed dehydration and the establishment of desiccation tolerance during seed maturation is altered in the Arabidopsis thaliana mutant atem6-1. Plant Cell Physiol 50:243–253
Marcotte WR Jr, Russell SH, Quatrano RS (1989) Abscisic acid responsive sequences from the Em gene of wheat. Plant Cell 1:969–976
Maul B, Volker U, Riethdorf S, Engelmann S, Hecker M (1995) Sigma B-dependent regulation of gsiB in response to multiple stimuli in Bacillus subtilis. Mol Gen Genet 248:114–120
Olvera-Carrillo Y, Campos F, Reyes JL, Garciarrubio A, Covarrubias AA (2010) Functional analysis of the group 4 late embryogenesis abundant proteins reveals their relevance in the adaptive response during water deficit in Arabidopsis thaliana. Plant Physiol 154:373–390
Olvera-Carrillo Y, Reyes JL, Covarrubias AA (2011) Late embryogenesis abundant proteins, versatile players in the plant adaptation to water limiting environments. Plant Signal Behav 6:586–589
Parcy F, Valon C, Raynal M, Gaubier-Comella P, Delseny M, Giraudat J (1994) Regulation of gene expression programs during Arabidopsis seed development: roles of the ABI3 locus and of endogenous abscisic acid. Plant Cell 6:1567–1582
Patel GB, Sprott GD (1990) Methanosaeta concilii gen. nov., sp. nov. (“Methanothrix concilii”) and Methanosaeta thermoacetophila nom. rev., comb. nov. Int J Syst Bacteriol 40:79–82
Reyes JL, Rodrigo MJ, Colmenero-Flores JM, Gil JV, Garay-Arroyo A, Campos F, Salamini F, Bartels D, Covarrubias AA (2005) Hydrophilins from distant organisms can protect enzymatic activities from water limitation effects in vitro. Plant Cell Environ 28:709–718
Reyes JL, Campos F, Wei H, Arora R, Yang Y, Karlson DT, Covarrubias AA (2008) Functional dissection of hydrophilins during in vitro freeze protection. Plant Cell Environ 31:1781–1790
Sharon MA, Kozarova A, Clegg JS, Vacratsis PO, Warner AH (2009) Characterization of a group 1 late embryogenesis abundant protein in encysted embryos of the brine shrimp Artemia franciscana. Biochem Cell Biol 87:415–430
Shih MD, Hoekstra FA, Hsing YC (2008) Late embryogenesis abundant proteins. Adv Bot Res 48:211–255
Shih MD, Huang LT, Wei FJ, Wu MT, Folkert A, Hoekstra FA, Hsing YC (2010) OsLEA1a, a new Em-like protein of cereal plants. Plant Cell Physiol 51:2132–2144
Soulages JL, Kim K, Walters C, Cushman JC (2002) Temperature-induced extended helix/random coil transitions in a group 1 late embryogenesis-abundant protein from soybean. Plant Physiol 128:822–832
Stacy RAP, Aalen RB (1998) Identification of sequence homology between the internal hydrophilic repeated motifs of Group 1 late-embryogenesis-abundant proteins in plants and hydrophilic repeats of the general stress protein GsiB of Bacillus subtilis. Planta 206:476–478
Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690
Tompa P, Bánki P, Bokor M, Kamasa P, Kovács D, Lasanda G, Tompa K (2006) Protein–water and protein–buffer interactions in the aqueous solution of an intrinsically unstructured plant dehydrin: NMR intensity and DSC aspects. Biophysical J 91:2243–2249
Tunnacliffe A, Lapinski J, McGee B (2005) A putative LEA protein, but no trehalose, is present in anhydrobiotic bdelloid rotifers. Hydrobiologia 181:315–321
Vicient C, Hull G, Guilleminot J, Devic M, Delseny M (2000) Differential expression of the Arabidopsis genes coding for Em-like proteins. J Exp Bot 51:1211–1220
Warner AH, Miroshnychenko O, Kozarova A, Vacratsis PO, MacRae TH, Kim J, Clegg JS (2010) Evidence for multiple group 1 late embryogenesis abundant proteins in encysted embryos of Artemia and their organelles. J Biochem 148:581–592
Wolkers WF, McCready S, Brandt WF, Lindsey GG, Hoekstra FA (2001) Isolation and characterization of a D-7 LEA protein from pollen that stabilizes glasses in vitro. Biochim Biophys Acta 1544:196–206
Xu D, Duan X, Wang B, Hong B, Ho T, Wu R (1996) Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice. Plant Physiol 110:249–257
Yotsui I, Saruhashi M, Kawato T, Taji T, Hayashi T, Quatrano RS, Sakata Y (2013) ABSCISIC ACID INSENSITIVE3 regulates abscisic acid-responsive gene expression with the nuclear factor Y complex through the ACTT-core element in Physcomitrella patens. New Phytol. doi: 10.1111/nph.12251
Zou Y, Hong R, He S, Liu G, Huang Z, Zheng Y (2011) Polyproline II structure is critical for the enzyme protective function of soybean Em (LEA1) conserved domains. Biotechnol Lett 33:1667–1673
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